Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 5.2e-87 324.3 161 100.0
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 6.4e-61 237.7 162 79.6
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 1.3e-26 123.6 169 50.9
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 3.0e-26 122.5 160 51.2
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 2.0e-22 109.8 167 46.7
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 5.9e-22 108.2 158 48.1
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 2.9e-21 105.9 146 47.9
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 3.8e-21 105.5 140 47.9
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 1.1e-20 104.0 146 45.2
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 1.9e-20 103.2 157 43.3
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.4e-18 97.1 164 43.3
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.9e-18 95.5 159 41.5
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 8.8e-18 94.4 157 40.8
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 8.8e-18 94.4 159 41.5
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.1e-17 94.0 146 45.9
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.1e-17 94.0 157 40.8
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.5e-17 93.6 159 41.5
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 2.0e-17 93.2 148 41.9
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.4e-17 92.0 158 42.4
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 7.4e-17 91.3 158 41.1
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.3e-16 90.5 120 49.2
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.3e-16 90.5 142 44.4
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.7e-16 90.1 138 46.4
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 3.7e-16 89.0 194 36.1
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 3.7e-16 89.0 157 43.9
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 8.2e-16 87.8 161 35.4
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.8e-15 86.7 151 41.7
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.1e-15 85.9 106 52.8
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 6.9e-15 84.7 118 44.9
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.5e-14 83.6 151 40.4
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 1.5e-14 83.6 145 40.7
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 4.5e-14 82.0 147 40.1
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.5e-14 82.0 158 43.0
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 5.9e-14 81.6 157 38.2
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 1.3e-13 80.5 142 39.4
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 1.3e-13 80.5 166 39.2
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.7e-13 80.1 140 37.1
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 2.2e-13 79.7 157 37.6
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 2.2e-13 79.7 140 38.6
PGSC0003DMG400034475 Solanum tuberosum HOM05D061896 ORTHO05D051302 2.9e-13 79.3 84 54.8
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 3.8e-13 79.0 143 39.9
Sopen12g030250 Solanum pennellii HOM05D061896 ORTHO05D051302 5.0e-13 78.6 84 54.8
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 1.1e-12 77.4 160 40.0
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 2.5e-12 76.3 149 37.6
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 2.5e-12 76.3 156 38.5
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 4.2e-12 75.5 186 32.8
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 5.5e-12 75.1 162 34.6
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 9.4e-12 74.3 157 38.2
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 9.4e-12 74.3 144 37.5
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 9.4e-12 74.3 152 40.1
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.2e-11 73.9 157 38.2
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.2e-11 73.9 174 35.1
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 2.1e-11 73.2 140 36.4
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 3.6e-11 72.4 171 32.7
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 3.6e-11 72.4 147 36.1
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 6.1e-11 71.6 157 37.6
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 1.4e-10 70.5 135 35.6
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 3.0e-10 69.3 152 35.5
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 3.9e-10 68.9 112 43.8
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 5.2e-10 68.6 159 37.7
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 6.7e-10 68.2 162 35.8
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 1.5e-09 67.0 146 36.3
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 1.5e-09 67.0 155 40.6
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 2.6e-09 66.2 146 35.6
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 3.3e-09 65.9 152 33.6
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.4e-09 65.5 180 34.4
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 4.4e-09 65.5 160 35.0
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 4.4e-09 65.5 160 35.0
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.7e-09 65.1 147 34.7
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 5.7e-09 65.1 138 34.8
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 5.7e-09 65.1 152 38.2
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 9.7e-09 64.3 175 34.9
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 9.7e-09 64.3 160 33.8
ECA246G5098 Erigeron canadensis HOM05D005317 ORTHO05D005146 9.7e-09 64.3 138 36.2
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 1.3e-08 63.9 162 34.6
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 1.3e-08 63.9 157 36.3
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.7e-08 63.5 143 37.1
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 2.2e-08 63.2 146 34.9
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 2.2e-08 63.2 148 32.4
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 3.7e-08 62.4 156 33.3
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.7e-08 62.4 145 33.8
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.7e-08 62.4 147 36.1
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.7e-08 62.4 147 36.1
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.7e-08 62.4 151 34.4
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 4.8e-08 62.0 139 36.0
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 4.8e-08 62.0 149 36.9
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 4.8e-08 62.0 135 36.3
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.3e-08 61.6 156 34.0
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 1.1e-07 60.8 97 40.2
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 1.4e-07 60.5 173 31.8
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 1.4e-07 60.5 165 34.5
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.8e-07 60.1 159 32.7
EL10Ac6g13373 Beta vulgaris HOM05D005317 ORTHO05D005146 2.4e-07 59.7 109 37.6
Haze_22390 Corylus avellana HOM05D000071 ORTHO05D000029 3.1e-07 59.3 140 32.9
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 5.3e-07 58.5 161 32.3
Ah.02g129000 Amaranthus hybridus HOM05D005317 ORTHO05D005146 5.3e-07 58.5 88 42.0
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.3e-07 58.5 162 32.7
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 5.3e-07 58.5 145 37.2
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.0e-07 58.2 157 35.0
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 9.1e-07 57.8 140 34.3
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 9.1e-07 57.8 150 30.7
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 9.1e-07 57.8 138 32.6
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-06 57.4 150 31.3
HPP92_026659 Vanilla planifolia HOM05D066124 ORTHO05D051582 1.6e-06 57.0 160 28.8
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.6e-06 56.2 169 33.1
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.6e-06 56.2 143 31.5
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 2.6e-06 56.2 130 36.9
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 3.5e-06 55.8 164 32.3
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 4.5e-06 55.5 130 33.1
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 4.5e-06 55.5 155 35.5


User provided reference genes

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