Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g030580 Solanum pennellii HOM05D000886 ORTHO05D000525 4.5e-64 247.7 118 100.0
PGSC0003DMG400006389 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.5e-27 126.3 190 41.6
CAN.G723.34 Capsicum annuum HOM05D000886 ORTHO05D000525 1.9e-25 119.4 191 40.3
Actinidia35513 Actinidia chinensis HOM05D000886 ORTHO05D000525 5.3e-20 101.3 189 34.4
Cfa016274 Carpinus fangiana HOM05D000886 ORTHO05D000525 2.0e-19 99.4 189 34.4
CSS0029635 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 1.3e-18 96.7 189 35.4
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 4.2e-17 91.7 180 33.3
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 1.2e-16 90.1 191 33.0
PGR083G1422 Punica granatum HOM05D000886 ORTHO05D000525 1.2e-16 90.1 184 32.6
PGR083G1689 Punica granatum HOM05D000886 ORTHO05D000525 4.6e-16 88.2 180 32.8
PGR083G2382 Punica granatum HOM05D000886 ORTHO05D000525 4.6e-16 88.2 180 32.8
Migut.A01095 Erythranthe guttata HOM05D000886 ORTHO05D000525 6.0e-16 87.8 191 32.5
Oeu053737.1 Olea europaea HOM05D000886 ORTHO05D000525 7.9e-16 87.4 190 31.1
HanXRQChr16g0528461 Helianthus annuus HOM05D000886 ORTHO05D000525 3.0e-15 85.5 45 80.0
Peaxi162Scf00626g00062 Petunia axillaris HOM05D000886 ORTHO05D000525 5.1e-15 84.7 45 82.2
SGA_v2.0_scaffold37G14598 Striga asiatica HOM05D000886 ORTHO05D000525 8.7e-15 84.0 54 72.2
Lsat_1_v5_gn_4_21321 Lactuca sativa HOM05D000886 ORTHO05D000525 2.5e-14 82.4 45 75.6
Actinidia16870 Actinidia chinensis HOM05D000886 ORTHO05D000525 4.3e-14 81.6 45 80.0
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 4.3e-14 81.6 45 80.0
arahy.Tifrunner.gnm1.ann1.R5PY9S Arachis hypogaea HOM05D000886 ORTHO05D000525 3.7e-13 78.6 45 73.3
TAR365G0209 Trochodendron aralioides HOM05D000886 ORTHO05D000525 3.7e-13 78.6 45 75.6
TAR636G3206 Trochodendron aralioides HOM05D000886 ORTHO05D000525 6.2e-13 77.8 45 75.6
Dinv30903 Davidia involucrata HOM05D000886 ORTHO05D000525 8.1e-13 77.4 43 79.1
Nitab4.5_0004525g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 8.1e-13 77.4 44 75.0
PGSC0003DMG400042198 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.1e-12 77.0 45 75.6
arahy.Tifrunner.gnm1.ann1.RM4DFR Arachis hypogaea HOM05D000886 ORTHO05D000525 1.4e-12 76.6 45 75.6
Nitab4.5_0001338g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.8e-12 76.3 44 72.7
Nitab4.5_0001338g0080 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.8e-12 76.3 45 71.1
Peaxi162Scf01061g00003 Petunia axillaris HOM05D000886 ORTHO05D000525 4.0e-12 75.1 45 68.9
CAN.G1076.27 Capsicum annuum HOM05D000886 ORTHO05D000525 1.2e-11 73.6 45 68.9
Sopen01g044180 Solanum pennellii HOM05D000886 ORTHO05D000525 3.4e-11 72.0 44 70.5
SalBow3G0713 Salvia bowleyana HOM05D000886 ORTHO05D000525 9.9e-11 70.5 182 29.7
Solyc01g100670.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 9.9e-11 70.5 45 66.7
Solyc01g100680.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 1.3e-10 70.1 45 66.7
Haze_07614 Corylus avellana HOM05D000886 ORTHO05D000525 2.9e-10 68.9 169 29.6
SHI02776 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-10 68.9 45 66.7
Lj5P282T58 Lonicera japonica HOM05D000886 ORTHO05D000525 4.9e-10 68.2 45 68.9
QL10p006297 Quercus lobata HOM05D000886 ORTHO05D000525 6.4e-10 67.8 45 62.2
PGSC0003DMG400037105 Solanum tuberosum HOM05D000886 ORTHO05D000525 6.4e-10 67.8 37 73.0
Aqoxy7G04062 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 8.4e-10 67.4 45 64.4
Rhsim13G0003000 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.1e-09 67.0 46 67.4
CAN.G1076.28 Capsicum annuum HOM05D000886 ORTHO05D000525 1.4e-09 66.6 45 57.8
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 1.9e-09 66.2 46 67.4
Dinv24473 Davidia involucrata HOM05D000886 ORTHO05D000525 2.4e-09 65.9 42 69.0
Peaxi162Scf00258g00126 Petunia axillaris HOM05D000886 ORTHO05D000525 2.4e-09 65.9 121 38.0
arahy.Tifrunner.gnm1.ann1.DS7W66 Arachis hypogaea HOM05D000886 ORTHO05D000525 2.7e-08 62.4 46 58.7
Oeu038042.1 Olea europaea HOM05D000886 ORTHO05D000525 7.9e-08 60.8 74 50.0
Oeu038044.1 Olea europaea HOM05D000886 ORTHO05D000525 7.9e-08 60.8 74 50.0
Cfa016273 Carpinus fangiana HOM05D000886 ORTHO05D000525 1.8e-07 59.7 187 27.8
Lj1g0006752 Lotus japonicus HOM05D000886 ORTHO05D000525 1.8e-07 59.7 46 56.5
AUR62006734 Chenopodium quinoa HOM05D000886 ORTHO05D000525 2.3e-07 59.3 45 60.0
EL10Ac4g09474 Beta vulgaris HOM05D000886 ORTHO05D000525 3.0e-07 58.9 45 60.0
Lj2g0021922 Lotus japonicus HOM05D000886 ORTHO05D000525 1.5e-06 56.6 55 54.5
ECA234G2044 Erigeron canadensis HOM05D000886 ORTHO05D000525 1.9e-06 56.2 45 53.3
Peaxi162Scf00357g00083 Petunia axillaris HOM05D000886 ORTHO05D000525 1.9e-06 56.2 178 25.3
Peaxi162Scf00357g00084 Petunia axillaris HOM05D000886 ORTHO05D000525 1.9e-06 56.2 178 25.3
Peaxi162Scf00357g00085 Petunia axillaris HOM05D000886 ORTHO05D000525 1.9e-06 56.2 178 25.3
Atru.chr5.961 Acer truncatum HOM05D000886 ORTHO05D000525 4.3e-06 55.1 46 54.3
CANSAT56G3317 Cannabis sativa HOM05D000886 ORTHO05D000525 4.3e-06 55.1 58 50.0
MBI18_g35542_MAGBIO Magnolia biondii HOM05D000886 ORTHO05D000525 5.6e-06 54.7 47 57.4


User provided reference genes

Program Settings