Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.2e-34 147.9 76 100.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 7.0e-34 146.7 76 98.7
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 5.6e-31 137.1 76 93.4
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 4.6e-25 117.5 77 83.1
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 2.8e-22 108.2 77 76.6
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 2.1e-17 92.0 63 76.2
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 7.3e-15 83.6 76 63.2
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 8.1e-14 80.1 76 60.5
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.1e-13 79.7 76 60.5
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.4e-13 78.6 76 59.2
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 6.8e-13 77.0 73 57.5
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.5e-12 75.9 69 59.4
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.6e-12 75.1 76 60.5
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 5.8e-12 73.9 76 57.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 1.7e-11 72.4 76 50.0
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.7e-11 72.4 77 53.2
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 8.4e-11 70.1 66 53.0
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-10 69.3 76 55.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.4e-10 69.3 66 51.5
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-10 68.9 76 56.6
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 1.9e-10 68.9 77 51.9
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 3.2e-10 68.2 77 51.9
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 3.2e-10 68.2 70 54.3
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-10 67.8 76 56.6
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.4e-10 67.4 76 51.3
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.4e-10 67.4 76 50.0
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 7.1e-10 67.0 66 56.1
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 9.2e-10 66.6 76 55.3
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-09 65.9 80 51.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.6e-09 65.9 76 53.9
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.6e-09 65.9 76 53.9
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.1e-09 65.5 76 55.3
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-09 65.1 76 56.6
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-09 65.1 80 51.2
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.7e-09 65.1 76 52.6
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.7e-09 65.1 67 55.2
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.5e-09 64.7 80 50.0
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 3.5e-09 64.7 77 50.6
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 3.5e-09 64.7 68 54.4
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 4.6e-09 64.3 79 53.2
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 4.6e-09 64.3 76 48.7
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.0e-09 63.9 76 55.3
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.0e-09 63.9 76 47.4
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.8e-09 63.5 78 53.8
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.8e-09 63.5 76 47.4
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 7.8e-09 63.5 75 48.0
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 7.8e-09 63.5 76 51.3
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.0e-08 63.2 79 51.9
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.0e-08 63.2 76 47.4
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-08 62.8 76 53.9
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.3e-08 62.8 77 48.1
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-08 62.8 70 48.6
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 2.3e-08 62.0 68 54.4
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 2.3e-08 62.0 71 47.9
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-08 61.6 76 51.3
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.9e-08 61.2 80 50.0
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 3.9e-08 61.2 77 49.4
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 3.9e-08 61.2 69 53.6
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-08 61.2 65 52.3
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.1e-08 60.8 66 54.5
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 5.1e-08 60.8 76 46.1
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 5.1e-08 60.8 84 44.0
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 6.6e-08 60.5 70 48.6
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.7e-08 60.1 69 49.3
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.7e-08 60.1 81 45.7
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 8.7e-08 60.1 76 44.7
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 8.7e-08 60.1 77 51.9
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 8.7e-08 60.1 71 52.1
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.1e-07 59.7 73 46.6
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.5e-07 59.3 83 48.2
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-07 59.3 75 53.3
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.9e-07 58.9 77 50.6
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 2.5e-07 58.5 78 48.7
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 2.5e-07 58.5 74 52.7
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 3.3e-07 58.2 67 50.7
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-07 58.2 75 52.0
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-07 58.2 70 47.1
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.3e-07 57.8 77 50.6
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 4.3e-07 57.8 75 50.7
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 5.6e-07 57.4 66 47.0
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 5.6e-07 57.4 73 52.1
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 7.3e-07 57.0 72 44.4
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 7.3e-07 57.0 67 47.8
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.6e-07 56.6 51 56.9
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 9.6e-07 56.6 70 51.4
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-06 56.2 77 49.4
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 1.2e-06 56.2 74 45.9
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-06 56.2 75 49.3
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-06 56.2 73 50.7
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-06 55.8 76 51.3
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-06 55.8 77 49.4
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-06 55.8 77 49.4
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.6e-06 54.7 77 49.4
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 3.6e-06 54.7 65 49.2
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 3.6e-06 54.7 74 45.9
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 4.7e-06 54.3 76 47.4


User provided reference genes

Program Settings