Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g030430 Solanum pennellii HOM05D000699 ORTHO05D000519 1.1e-53 214.5 137 100.0
Solyc11g073140.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 6.5e-46 188.7 89 97.8
Sopen11g030790 Solanum pennellii HOM05D000699 ORTHO05D000519 5.5e-45 185.7 87 97.7
Peaxi162Scf00152g00132 Petunia axillaris HOM05D000699 ORTHO05D000519 1.5e-34 151.0 87 81.6
Nitab4.5_0000436g0100 Nicotiana tabacum HOM05D000699 ORTHO05D000519 2.6e-34 150.2 82 84.1
Nitab4.5_0000292g0090 Nicotiana tabacum HOM05D000699 ORTHO05D000519 2.2e-33 147.1 68 92.6
CAN.G1231.16 Capsicum annuum HOM05D000699 ORTHO05D000519 4.5e-31 139.4 77 77.9
PGSC0003DMG400025774 Solanum tuberosum HOM05D000699 ORTHO05D000519 1.7e-30 137.5 69 88.4
PGSC0003DMG400025775 Solanum tuberosum HOM05D000699 ORTHO05D000519 6.5e-30 135.6 63 88.9
Peaxi162Scf00152g00239 Petunia axillaris HOM05D000699 ORTHO05D000519 2.5e-29 133.7 78 75.6
PGSC0003DMG400021585 Solanum tuberosum HOM05D000699 ORTHO05D000519 2.5e-29 133.7 73 79.5
Sopen01g049890 Solanum pennellii HOM05D000699 ORTHO05D000519 3.2e-29 133.3 69 85.5
Solyc01g107710.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 7.2e-29 132.1 65 80.0
CAN.G1231.15 Capsicum annuum HOM05D000699 ORTHO05D000519 1.6e-28 131.0 72 80.6
Solyc01g107720.3 Solanum lycopersicum HOM05D000699 ORTHO05D000519 4.7e-28 129.4 74 78.4
Sopen01g049900 Solanum pennellii HOM05D000699 ORTHO05D000519 6.1e-28 129.0 63 82.5
Peaxi162Scf00016g02253 Petunia axillaris HOM05D000699 ORTHO05D000519 1.1e-24 118.2 100 60.0
Solyc06g034130.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 1.3e-22 111.3 74 70.3
Nitab4.5_0002815g0110 Nicotiana tabacum HOM05D000699 ORTHO05D000519 9.4e-21 105.1 55 80.0
Sopen06g010790 Solanum pennellii HOM05D000699 ORTHO05D000519 3.6e-20 103.2 64 68.8
Nitab4.5_0005392g0070 Nicotiana tabacum HOM05D000699 ORTHO05D000519 4.7e-20 102.8 55 78.2
Nitab4.5_0009329g0010 Nicotiana tabacum HOM05D000699 ORTHO05D000519 4.7e-20 102.8 55 78.2
arahy.Tifrunner.gnm1.ann1.9BC1I1 Arachis hypogaea HOM05D000699 ORTHO05D000519 1.2e-18 98.2 83 57.8
arahy.Tifrunner.gnm1.ann1.AR92CS Arachis hypogaea HOM05D000699 ORTHO05D000519 1.2e-18 98.2 83 57.8
ClCG02G006230 Citrullus lanatus HOM05D000699 ORTHO05D000519 1.2e-18 98.2 76 55.3
HanXRQChr10g0291481 Helianthus annuus HOM05D000699 ORTHO05D000519 1.5e-18 97.8 76 59.2
CsaV3_7G008300 Cucumis sativus L. HOM05D000699 ORTHO05D000519 3.3e-18 96.7 72 58.3
HanXRQChr16g0509871 Helianthus annuus HOM05D000699 ORTHO05D000519 5.7e-18 95.9 81 56.8
HanXRQChr16g0509881 Helianthus annuus HOM05D000699 ORTHO05D000519 7.5e-18 95.5 73 61.6
Lj9A321T82 Lonicera japonica HOM05D000699 ORTHO05D000519 4.8e-17 92.8 86 53.5
THA.LOC104825374 Tarenaya hassleriana HOM05D000699 ORTHO05D000519 6.3e-17 92.4 75 53.3
Sed0016996 Sechium edule HOM05D000699 ORTHO05D000519 1.4e-16 91.3 77 54.5
HanXRQChr16g0510081 Helianthus annuus HOM05D000699 ORTHO05D000519 3.1e-16 90.1 65 60.0
HanXRQChr16g0510091 Helianthus annuus HOM05D000699 ORTHO05D000519 3.1e-16 90.1 65 60.0
SGA_v2.0_scaffold225G43085 Striga asiatica HOM05D000699 ORTHO05D000519 3.1e-16 90.1 84 53.6
Lsat_1_v5_gn_7_86261 Lactuca sativa HOM05D000699 ORTHO05D000519 4.1e-16 89.7 76 55.3
HanXRQChr16g0510061 Helianthus annuus HOM05D000699 ORTHO05D000519 1.2e-15 88.2 61 62.3
EL10Ac3g05208 Beta vulgaris HOM05D000699 ORTHO05D000519 1.6e-15 87.8 87 50.6
Prupe.8G132700 Prunus persica HOM05D000699 ORTHO05D000519 1.6e-15 87.8 76 56.6
HanXRQChr16g0510031 Helianthus annuus HOM05D000699 ORTHO05D000519 2.0e-15 87.4 85 51.8
Lsat_1_v5_gn_3_95940 Lactuca sativa HOM05D000699 ORTHO05D000519 2.0e-15 87.4 76 53.9
Lsat_1_v5_gn_7_86221 Lactuca sativa HOM05D000699 ORTHO05D000519 2.0e-15 87.4 76 53.9
Lsat_1_v5_gn_7_86661 Lactuca sativa HOM05D000699 ORTHO05D000519 2.0e-15 87.4 76 53.9
AUR62013253 Chenopodium quinoa HOM05D000699 ORTHO05D000519 4.5e-15 86.3 73 54.8
Lsat_1_v5_gn_7_86641 Lactuca sativa HOM05D000699 ORTHO05D000519 4.5e-15 86.3 71 54.9
MD05G1087500 Malus domestica HOM05D000699 ORTHO05D000519 4.5e-15 86.3 68 58.8
Oeu013736.1 Olea europaea HOM05D000699 ORTHO05D000519 7.7e-15 85.5 78 52.6
MELO3C018477.2 Cucumis melo HOM05D000699 ORTHO05D000519 1.3e-14 84.7 62 58.1
HanXRQChr16g0509861 Helianthus annuus HOM05D000699 ORTHO05D000519 1.3e-14 84.7 85 48.2
Phvul.006G126400 Phaseolus vulgaris HOM05D000699 ORTHO05D000519 1.3e-14 84.7 82 51.2
PGR042G0840 Punica granatum HOM05D000699 ORTHO05D000519 2.2e-14 84.0 75 50.7
AUR62028849 Chenopodium quinoa HOM05D000699 ORTHO05D000519 5.0e-14 82.8 72 50.0
FvH4_2g05430 Fragaria vesca HOM05D000699 ORTHO05D000519 6.5e-14 82.4 59 59.3
AL3G32840 Arabidopsis lyrata HOM05D000699 ORTHO05D000519 8.5e-14 82.0 75 53.3
AT3G19430 Arabidopsis thaliana HOM05D000699 ORTHO05D000519 8.5e-14 82.0 75 53.3
DCAR_003946 Daucus carota HOM05D000699 ORTHO05D000519 8.5e-14 82.0 73 49.3
A05p30180 Brassica napus HOM05D000699 ORTHO05D000519 1.1e-13 81.6 82 51.2
BraA05t21858Z Brassica rapa HOM05D000699 ORTHO05D000519 1.1e-13 81.6 82 51.2
BcaC05g28476 Brassica carinata HOM05D000699 ORTHO05D000519 1.5e-13 81.3 78 53.8
C05p45610 Brassica napus HOM05D000699 ORTHO05D000519 1.5e-13 81.3 78 53.8
BolC5t33285H Brassica oleracea HOM05D000699 ORTHO05D000519 1.5e-13 81.3 78 53.8
PSO724G0461 Papaver somniferum HOM05D000699 ORTHO05D000519 1.5e-13 81.3 91 49.5
ECA236G1996 Erigeron canadensis HOM05D000699 ORTHO05D000519 2.5e-13 80.5 79 45.6
Medtr2g030825 Medicago truncatula HOM05D000699 ORTHO05D000519 2.5e-13 80.5 86 51.2
Medtr2g030845 Medicago truncatula HOM05D000699 ORTHO05D000519 2.5e-13 80.5 86 51.2
FAN24G2436 Fragaria x ananassa HOM05D000699 ORTHO05D000519 4.2e-13 79.7 67 50.7
EL10Ac9g22303 Beta vulgaris HOM05D000699 ORTHO05D000519 5.5e-13 79.3 80 47.5
TAR633G2749 Trochodendron aralioides HOM05D000699 ORTHO05D000519 5.5e-13 79.3 85 44.7
AUR62006030 Chenopodium quinoa HOM05D000699 ORTHO05D000519 7.2e-13 79.0 67 55.2
AUR62023735 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.2e-12 78.2 72 47.2
AUR62035598 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.6e-12 77.8 71 52.1
BcaB06g26002 Brassica carinata HOM05D000699 ORTHO05D000519 2.1e-12 77.4 72 54.2
PSO729G0179 Papaver somniferum HOM05D000699 ORTHO05D000519 3.6e-12 76.6 76 51.3
Thhalv10022024m.g Eutrema salsugineum HOM05D000699 ORTHO05D000519 4.7e-12 76.3 60 56.7
TPR.G27827 Trifolium pratense HOM05D000699 ORTHO05D000519 4.7e-12 76.3 75 50.7
CARHR094830 Cardamine hirsuta HOM05D000699 ORTHO05D000519 6.1e-12 75.9 60 56.7
PSO302G0231 Papaver somniferum HOM05D000699 ORTHO05D000519 1.4e-11 74.7 88 46.6
BcaC09g48896 Brassica carinata HOM05D000699 ORTHO05D000519 2.3e-11 73.9 90 42.2
BcaC09g48897 Brassica carinata HOM05D000699 ORTHO05D000519 2.3e-11 73.9 90 42.2
A01p35230 Brassica napus HOM05D000699 ORTHO05D000519 2.3e-11 73.9 90 42.2
C01p44670 Brassica napus HOM05D000699 ORTHO05D000519 2.3e-11 73.9 90 42.2
BolC1t04436H Brassica oleracea HOM05D000699 ORTHO05D000519 2.3e-11 73.9 90 42.2
BraA01t03604Z Brassica rapa HOM05D000699 ORTHO05D000519 2.3e-11 73.9 90 42.2
PSO170G0806 Papaver somniferum HOM05D000699 ORTHO05D000519 2.3e-11 73.9 88 46.6
PSO170G6907 Papaver somniferum HOM05D000699 ORTHO05D000519 2.3e-11 73.9 88 46.6
PSO541G5354 Papaver somniferum HOM05D000699 ORTHO05D000519 4.0e-11 73.2 95 42.1
Aa31LG8G6180 Aethionema arabicum HOM05D000699 ORTHO05D000519 5.2e-11 72.8 84 42.9
BcaB04g20704 Brassica carinata HOM05D000699 ORTHO05D000519 5.2e-11 72.8 83 44.6
QL11p034220 Quercus lobata HOM05D000699 ORTHO05D000519 6.8e-11 72.4 74 47.3
ECA236G1582 Erigeron canadensis HOM05D000699 ORTHO05D000519 2.6e-10 70.5 71 46.5
Psat1g165640 Pisum sativum HOM05D000699 ORTHO05D000519 1.3e-09 68.2 68 51.5
Medtr2g021580 Medicago truncatula HOM05D000699 ORTHO05D000519 1.7e-09 67.8 64 45.3
Atru.chr5.2593 Acer truncatum HOM05D000699 ORTHO05D000519 8.3e-09 65.5 75 41.3
Potri.009G097400 Populus trichocarpa HOM05D000699 ORTHO05D000519 4.1e-08 63.2 65 41.5
Peaxi162Scf00152g00015 Petunia axillaris HOM05D000699 ORTHO05D000519 1.6e-07 61.2 78 42.3
PSO675G3610 Papaver somniferum HOM05D000699 ORTHO05D000519 3.5e-07 60.1 83 42.2
Ah.01g010790 Amaranthus hybridus HOM05D000182 ORTHO05D000112 2.3e-06 57.4 43 58.1
PSO782G2038 Papaver somniferum HOM05D000699 ORTHO05D000519 2.3e-06 57.4 88 42.0
AUR62016785 Chenopodium quinoa HOM05D000699 ORTHO05D000519 5.0e-06 56.2 56 46.4


User provided reference genes

Program Settings