Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g028650 Solanum pennellii HOM05D000576 ORTHO05D000368 1.0e-96 356.7 177 100.0
PGSC0003DMG401027561 Solanum tuberosum HOM05D000576 ORTHO05D000368 2.3e-43 179.5 345 38.0
Sopen04g028540 Solanum pennellii HOM05D000576 ORTHO05D000368 5.1e-27 125.2 70 88.6
Sopen04g028590 Solanum pennellii HOM05D000576 ORTHO05D000368 3.7e-17 92.4 311 28.3
CAN.G617.7 Capsicum annuum HOM05D000576 ORTHO05D000368 4.8e-17 92.0 70 65.7
PGSC0003DMG400017941 Solanum tuberosum HOM05D000576 ORTHO05D000368 3.1e-16 89.4 349 27.2
PGSC0003DMG400010328 Solanum tuberosum HOM05D000576 ORTHO05D000368 6.9e-16 88.2 349 27.2
Nitab4.5_0004992g0040 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.6e-15 86.3 63 69.8
CAN.G617.8 Capsicum annuum HOM05D000576 ORTHO05D000368 3.4e-15 85.9 77 61.0
Solyc04g072435.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 1.9e-13 80.1 71 56.3
Solyc04g150167.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 1.6e-12 77.0 71 54.9
Nitab4.5_0004992g0030 Nicotiana tabacum HOM05D000576 ORTHO05D000368 7.9e-12 74.7 77 55.8
Nitab4.5_0000099g0260 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.3e-11 73.9 77 53.2
Peaxi162Scf00041g00103 Petunia axillaris HOM05D000576 ORTHO05D000368 5.1e-11 72.0 74 51.4
PGSC0003DMG402009486 Solanum tuberosum HOM05D000576 ORTHO05D000368 6.7e-11 71.6 117 44.4
Nitab4.5_0008827g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.1e-10 70.9 77 51.9
Peaxi162Scf00041g00112 Petunia axillaris HOM05D000576 ORTHO05D000368 2.5e-10 69.7 70 50.0
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.3e-10 68.9 79 46.8
Hma1.2p1_1677F.1_g297050 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.3e-10 68.9 79 46.8
Peaxi162Scf00310g00017 Petunia axillaris HOM05D000576 ORTHO05D000368 4.3e-10 68.9 70 48.6
Nitab4.5_0001735g0180 Nicotiana tabacum HOM05D000576 ORTHO05D000368 5.7e-10 68.6 74 52.7
Nitab4.5_0002146g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 5.7e-10 68.6 74 50.0
Nitab4.5_0001307g0180 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.8e-09 66.2 70 54.3
Nitab4.5_0001992g0030 Nicotiana tabacum HOM05D000576 ORTHO05D000368 4.8e-09 65.5 74 50.0
Nitab4.5_0005673g0030 Nicotiana tabacum HOM05D000576 ORTHO05D000368 5.3e-08 62.0 79 49.4
CAN.G1261.4 Capsicum annuum HOM05D000576 ORTHO05D000368 1.5e-07 60.5 76 50.0
Peaxi162Scf00263g01017 Petunia axillaris HOM05D000576 ORTHO05D000368 2.0e-07 60.1 114 35.1
QL08p062492 Quercus lobata HOM05D000576 ORTHO05D000368 2.0e-07 60.1 78 42.3
Migut.J00273 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.6e-07 59.7 79 43.0
Migut.J01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.5e-07 58.9 72 47.2
Migut.J00214 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.7e-07 58.2 71 46.5
PGSC0003DMG400026860 Solanum tuberosum HOM05D000576 ORTHO05D000368 1.0e-06 57.8 79 46.8
Migut.J00211 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.7e-06 57.0 71 45.1
Migut.G00964 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.2e-06 56.6 77 46.8
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.2e-06 56.6 70 44.3
Migut.J00208 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.9e-06 56.2 72 48.6
Nitab4.5_0000553g0070 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.9e-06 56.2 77 50.6
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 5.0e-06 55.5 70 40.0
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 6.5e-06 55.1 80 37.5


User provided reference genes

Program Settings