Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g028540 Solanum pennellii HOM05D000576 ORTHO05D000368 2.9e-54 214.9 105 100.0
PGSC0003DMG401027561 Solanum tuberosum HOM05D000576 ORTHO05D000368 5.5e-45 184.1 105 83.8
CAN.G617.7 Capsicum annuum HOM05D000576 ORTHO05D000368 4.7e-28 127.9 93 69.9
Sopen04g028650 Solanum pennellii HOM05D000576 ORTHO05D000368 2.3e-27 125.6 70 88.6
PGSC0003DMG400010328 Solanum tuberosum HOM05D000576 ORTHO05D000368 1.7e-22 109.4 102 54.9
PGSC0003DMG400017941 Solanum tuberosum HOM05D000576 ORTHO05D000368 2.2e-22 109.0 93 60.2
Solyc04g072435.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 6.1e-20 100.9 93 58.1
Solyc04g150167.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 5.2e-19 97.8 93 57.0
Sopen04g028590 Solanum pennellii HOM05D000576 ORTHO05D000368 5.2e-19 97.8 93 57.0
Nitab4.5_0008827g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 9.8e-18 93.6 93 55.9
Peaxi162Scf00041g00112 Petunia axillaris HOM05D000576 ORTHO05D000368 1.3e-17 93.2 93 51.6
Peaxi162Scf00310g00017 Petunia axillaris HOM05D000576 ORTHO05D000368 1.7e-17 92.8 105 45.7
PGSC0003DMG400026860 Solanum tuberosum HOM05D000576 ORTHO05D000368 6.3e-17 90.9 93 54.8
Peaxi162Scf00041g00103 Petunia axillaris HOM05D000576 ORTHO05D000368 1.1e-16 90.1 94 53.2
Nitab4.5_0005673g0030 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.4e-16 89.7 93 52.7
PGSC0003DMG402009486 Solanum tuberosum HOM05D000576 ORTHO05D000368 5.4e-16 87.8 105 47.6
Nitab4.5_0000099g0260 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.7e-15 85.5 93 51.6
CAN.G1261.4 Capsicum annuum HOM05D000576 ORTHO05D000368 1.3e-14 83.2 89 51.7
Migut.J00273 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.5e-13 77.8 105 42.9
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.0e-12 73.9 105 40.0
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.0e-11 73.6 80 46.2
Hma1.2p1_1677F.1_g297050 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.0e-11 73.6 80 46.2
QL08p062492 Quercus lobata HOM05D000576 ORTHO05D000368 2.0e-10 69.3 84 41.7
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 2.6e-10 68.9 105 38.1
Nitab4.5_0008140g0040 Nicotiana tabacum HOM05D000576 ORTHO05D000368 4.4e-10 68.2 92 47.8
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 5.7e-10 67.8 89 38.2
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 2.8e-09 65.5 89 37.1
Oeu048256.1 Olea europaea HOM05D000576 ORTHO05D000368 2.8e-09 65.5 89 37.1
Prupe.7G069200 Prunus persica HOM05D000576 ORTHO05D000368 6.3e-09 64.3 96 35.4
Cc10_g03840 Coffea canephora HOM05D000576 ORTHO05D000368 1.1e-08 63.5 96 43.8
ECA233G4739 Erigeron canadensis HOM05D000576 ORTHO05D000368 1.1e-08 63.5 105 36.2
Migut.J00208 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-08 63.5 91 44.0
MD14G1064800 Malus domestica HOM05D000576 ORTHO05D000368 1.1e-08 63.5 96 37.5
Migut.J01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.8e-08 62.8 82 43.9
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 2.4e-08 62.4 91 41.8
Migut.J00214 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.4e-08 62.4 81 44.4
Lj1A70T15 Lonicera japonica HOM05D000576 ORTHO05D000368 2.4e-08 62.4 80 41.2
Cc10_g03770 Coffea canephora HOM05D000576 ORTHO05D000368 3.1e-08 62.0 96 43.8
Migut.G00964 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.1e-08 62.0 92 41.3
Migut.G00965 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.1e-08 62.0 89 37.1
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.4e-08 61.2 89 37.1
Migut.J00211 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.4e-08 61.2 81 43.2
Migut.F01284 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.2e-07 60.1 83 45.8
Migut.G01093 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.2e-07 60.1 87 37.9
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.2e-07 60.1 90 42.2
Migut.D00340 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.0e-07 59.3 89 40.4
Migut.G01312 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.0e-07 59.3 80 42.5
HanXRQChr09g0252871 Helianthus annuus HOM05D000576 ORTHO05D000368 2.0e-07 59.3 93 36.6
Haze_16783 Corylus avellana HOM05D000576 ORTHO05D000368 3.5e-07 58.5 79 43.0
Migut.J00210 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.5e-07 58.5 89 34.8
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 4.5e-07 58.2 80 40.0
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.5e-07 58.2 82 42.7
Hma1.2p1_2024F.1_g311420 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.5e-07 58.2 82 42.7
Lj7A195T11 Lonicera japonica HOM05D000576 ORTHO05D000368 4.5e-07 58.2 80 38.8
Cc11_g02250 Coffea canephora HOM05D000576 ORTHO05D000368 5.9e-07 57.8 89 38.2
Migut.J00163 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.7e-07 57.4 89 42.7
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.0e-06 57.0 84 41.7
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 1.0e-06 57.0 99 36.4
Solyc09g030455.1 Solanum lycopersicum HOM05D000576 ORTHO05D000368 1.0e-06 57.0 56 46.4
Migut.J00790 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.3e-06 56.6 88 38.6
Hma1.2p1_0728F.1_g209430 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.3e-06 56.6 84 40.5
Hma1.2p1_0728F.1_g209440 Hydrangea macrophylla HOM05D000576 ORTHO05D016187 1.3e-06 56.6 84 40.5
Hma1.2p1_2304F.1_g319335 Hydrangea macrophylla HOM05D000576 ORTHO05D016187 1.3e-06 56.6 84 40.5
COL.COLO4_27090 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.3e-06 55.8 89 40.4
Migut.J00162 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.3e-06 55.8 89 39.3
Migut.B01302 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.8e-06 55.1 91 38.5
Migut.E01276 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.8e-06 55.1 81 43.2
Migut.J01178 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.8e-06 55.1 98 35.7
Rhsim02G0021500 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.8e-06 55.1 78 39.7
Migut.C00187 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.0e-06 54.7 82 41.5
Hma1.2p1_0418F.1_g149130 Hydrangea macrophylla HOM05D021695 ORTHO05D013658 5.0e-06 54.7 79 43.0
Cc10_g14300 Coffea canephora HOM05D000576 ORTHO05D000368 6.6e-06 54.3 81 42.0
SGA_v2.0_scaffold342G49402 Striga asiatica HOM05D000576 ORTHO05D000368 6.6e-06 54.3 79 39.2
Dinv38540 Davidia involucrata HOM05D000576 ORTHO05D013658 8.6e-06 53.9 96 42.7
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 8.6e-06 53.9 92 35.9
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.6e-06 53.9 81 38.3
Migut.N02494 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.6e-06 53.9 79 44.3


User provided reference genes

Program Settings