Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 7.1e-102 374.0 200 100.0
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 6.0e-101 370.9 200 99.0
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 3.5e-93 345.1 202 92.6
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 4.5e-88 328.2 201 85.1
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.0e-84 317.0 197 81.2
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.1e-81 305.4 203 79.3
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 7.2e-78 294.3 197 74.1
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 9.7e-75 283.9 197 70.1
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 2.8e-74 282.3 198 70.7
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 8.2e-74 280.8 198 69.7
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.1e-73 280.4 198 69.2
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.4e-73 280.0 198 73.2
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.4e-73 279.3 195 69.7
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 4.1e-73 278.5 198 72.7
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 4.1e-73 278.5 198 69.2
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 5.3e-73 278.1 197 70.6
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 9.1e-73 277.3 198 68.7
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 2.6e-72 275.8 200 67.0
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.6e-72 275.8 197 69.5
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 3.4e-72 275.4 198 65.7
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 7.7e-72 274.2 198 67.7
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.3e-71 273.5 198 68.2
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.7e-71 273.1 198 68.2
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 5.0e-71 271.6 198 66.7
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 5.0e-71 271.6 197 68.5
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 6.5e-71 271.2 201 65.2
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 8.5e-71 270.8 195 68.2
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.1e-70 270.4 197 67.5
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.1e-70 270.4 197 67.0
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.4e-70 270.0 197 68.0
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.4e-70 270.0 195 68.2
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 2.5e-70 269.2 192 67.7
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 2.5e-70 269.2 197 67.5
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 4.2e-70 268.5 198 65.7
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 5.5e-70 268.1 197 65.5
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 5.5e-70 268.1 199 68.8
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 9.4e-70 267.3 198 63.1
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 9.4e-70 267.3 197 65.0
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.2e-69 266.9 196 65.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.2e-69 266.9 195 66.2
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.6e-69 266.5 201 66.2
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.6e-69 266.5 201 66.2
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 2.1e-69 266.2 198 64.6
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.1e-69 266.2 197 66.0
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 4.7e-69 265.0 198 64.6
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 7.9e-69 264.2 198 65.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 7.9e-69 264.2 195 65.6
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.0e-68 263.8 198 66.2
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.0e-68 263.8 197 64.0
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 2.3e-68 262.7 198 64.6
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 2.3e-68 262.7 197 64.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 2.3e-68 262.7 196 66.3
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.9e-68 261.9 195 67.7
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 3.9e-68 261.9 199 65.8
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 3.9e-68 261.9 198 63.1
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 6.7e-68 261.2 196 63.8
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 6.7e-68 261.2 196 63.8
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 6.7e-68 261.2 196 63.8
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 6.7e-68 261.2 198 63.1
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 6.7e-68 261.2 198 63.1
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.8e-68 260.8 198 63.1
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.1e-67 260.4 198 64.1
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 1.5e-67 260.0 203 64.5
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.0e-67 259.6 197 62.9
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.0e-67 259.6 194 63.9
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.3e-67 258.8 198 62.6
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 5.7e-67 258.1 195 63.6
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.7e-67 258.1 225 60.9
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.4e-67 257.7 198 60.6
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 7.4e-67 257.7 198 60.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 7.4e-67 257.7 195 66.2
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 7.4e-67 257.7 196 64.8
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 9.7e-67 257.3 198 62.6
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.3e-66 256.9 196 64.3
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.3e-66 256.9 197 64.0
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.3e-66 256.9 198 63.1
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.3e-66 256.9 211 64.0
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 1.7e-66 256.5 198 62.6
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 2.8e-66 255.8 195 65.1
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 3.7e-66 255.4 206 61.2
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.4e-65 253.4 198 64.1
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.8e-65 253.1 164 81.1
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 2.4e-65 252.7 207 60.4
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 7.0e-65 251.1 195 65.6
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.6e-64 249.2 195 63.1
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 3.5e-64 248.8 195 64.1
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.2e-63 246.1 197 60.4
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 3.8e-63 245.4 189 65.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.8e-58 229.2 134 79.9
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.1e-57 227.3 198 61.6
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.8e-57 226.5 270 47.8
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.2e-56 223.8 165 69.1
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 7.2e-54 214.5 188 62.2
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 2.1e-53 213.0 196 54.6
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 8.0e-53 211.1 196 53.1
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 8.8e-52 207.6 164 65.9
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.2e-51 207.2 164 64.6
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 7.0e-49 198.0 172 58.1
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.2e-48 197.2 188 51.1
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.2e-48 197.2 164 61.0
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 5.9e-48 194.9 165 62.4
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 2.9e-47 192.6 198 56.1
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 6.5e-47 191.4 178 56.7
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 6.5e-47 191.4 167 58.7
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 5.2e-44 181.8 137 63.5
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.3e-39 167.2 201 44.8
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 9.5e-38 161.0 193 46.6
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.6e-37 159.1 139 61.2
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.4e-33 145.2 194 41.8
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 7.3e-30 134.8 196 39.8
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 9.5e-30 134.4 193 39.4
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 8.0e-29 131.3 72 80.6
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 9.8e-27 124.4 195 41.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 4.1e-17 92.4 56 71.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 7.3e-06 55.1 53 58.5


User provided reference genes

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