Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 5.7e-37 157.5 109 100.0
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.5e-34 148.3 109 94.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.2e-28 129.0 98 93.9
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.3e-28 127.1 109 83.5
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 5.5e-24 114.4 109 78.9
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 1.5e-21 106.3 106 77.4
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.7e-20 102.8 108 69.4
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 4.9e-20 101.3 110 71.8
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.9e-20 101.3 108 75.0
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.3e-20 100.5 98 75.5
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 8.3e-20 100.5 98 75.5
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.4e-19 99.8 109 72.5
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.0e-18 95.9 88 71.6
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-17 92.8 108 63.9
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.6e-17 90.5 64 71.9
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.1e-16 90.1 101 62.4
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 2.5e-16 89.0 103 74.8
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.6e-16 87.8 109 65.1
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.1e-15 85.9 65 64.6
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.1e-15 84.3 64 64.1
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.0e-14 82.0 65 66.2
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.8e-14 80.9 102 65.7
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.9e-14 80.5 65 63.1
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 8.9e-14 80.5 48 75.0
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.6e-13 79.0 89 76.4
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 3.4e-13 78.6 97 76.3
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.3e-12 76.6 110 64.5
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.2e-12 75.9 98 60.2
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.9e-12 75.5 89 74.2
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 4.9e-12 74.7 111 64.9
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 4.9e-12 74.7 87 79.3
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.1e-11 73.6 63 57.1
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.1e-11 73.6 66 60.6
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.2e-11 72.0 62 61.3
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 4.1e-11 71.6 111 53.2
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 7.0e-11 70.9 64 59.4
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.2e-11 70.5 104 67.3
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.2e-11 70.5 104 67.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 1.2e-10 70.1 96 42.7
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.2e-10 70.1 104 67.3
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.2e-10 70.1 85 62.4
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.6e-10 69.7 46 67.4
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.7e-10 68.9 87 49.4
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.7e-10 68.9 64 59.4
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.5e-10 68.6 108 65.7
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.6e-10 68.2 44 68.2
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.0e-10 67.8 85 72.9
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 7.8e-10 67.4 143 48.3
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.0e-09 67.0 78 64.1
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.0e-09 67.0 42 71.4
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 1.7e-09 66.2 67 53.7
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.7e-09 66.2 45 66.7
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.7e-09 66.2 81 49.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.3e-09 65.9 107 53.3
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.9e-09 65.1 65 55.4
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 3.9e-09 65.1 56 57.1
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.9e-09 65.1 75 48.0
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.9e-09 65.1 102 60.8
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.9e-09 65.1 41 70.7
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.0e-09 64.7 65 56.9
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.0e-09 64.7 42 71.4
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.0e-09 64.7 98 62.2
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 5.0e-09 64.7 85 68.2
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 6.6e-09 64.3 76 44.7
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 8.6e-09 63.9 87 55.2
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 8.6e-09 63.9 82 75.6
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.1e-08 63.5 86 70.9
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-08 63.5 104 64.4
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-08 63.5 80 68.8
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.1e-08 63.5 102 58.8
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.5e-08 63.2 85 72.9
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.5e-08 63.2 85 72.9
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.5e-08 63.2 85 72.9
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.9e-08 62.8 85 68.2
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.9e-08 62.8 71 47.9
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.9e-08 62.8 71 47.9
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.9e-08 62.8 41 65.9
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.9e-08 62.8 42 64.3
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.5e-08 62.4 36 72.2
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-08 62.4 135 51.1
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-08 62.4 135 51.1
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.3e-08 61.6 46 65.2
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 5.6e-08 61.2 42 59.5
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.6e-08 61.2 111 60.4
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.6e-08 61.2 92 70.7
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 7.3e-08 60.8 50 58.0
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 7.3e-08 60.8 88 67.0
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 7.3e-08 60.8 88 47.7
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 9.5e-08 60.5 101 55.4
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.5e-08 60.5 68 50.0
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 9.5e-08 60.5 89 69.7
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.2e-07 60.1 67 53.7
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-07 60.1 116 50.9
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.1e-07 59.3 39 66.7
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.1e-07 59.3 51 56.9
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.1e-07 59.3 51 56.9
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.1e-07 59.3 87 63.2
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 2.8e-07 58.9 108 38.0
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.8e-07 58.9 46 63.0
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.6e-07 58.5 100 60.0
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 8.0e-07 57.4 42 59.5
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 8.0e-07 57.4 102 61.8
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 8.0e-07 57.4 35 71.4
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.1e-06 57.0 83 44.6
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.4e-06 56.6 110 57.3
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-06 56.6 90 64.4
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.4e-06 56.6 86 68.6
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.4e-06 56.6 86 68.6
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.8e-06 56.2 85 70.6
QL02p029894 Quercus lobata HOM05D002255 ORTHO05D002288 1.8e-06 56.2 96 66.7
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.3e-06 55.8 85 71.8
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 2.3e-06 55.8 112 59.8
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.1e-06 55.5 84 35.7
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 3.1e-06 55.5 42 54.8
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-06 55.1 96 56.2
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.0e-06 55.1 49 59.2
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-06 55.1 92 58.7
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-06 55.1 41 61.0
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 5.2e-06 54.7 87 66.7
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 5.2e-06 54.7 61 50.8
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 6.8e-06 54.3 44 56.8


User provided reference genes

Program Settings