Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 0.0e+00 1369.8 678 100.0
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 4.2e-311 1070.8 678 79.2
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 4.5e-265 917.9 688 69.3
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.6e-238 829.7 670 65.5
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 9.2e-202 707.6 406 86.5
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 8.5e-155 551.6 379 72.3
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.6e-145 519.2 696 43.8
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.0e-144 518.1 684 44.2
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 3.0e-144 516.5 691 44.7
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.4e-141 506.9 680 43.8
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 2.2e-139 500.4 611 46.8
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.4e-138 497.7 691 43.8
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 2.3e-136 490.3 691 42.1
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 2.3e-136 490.3 721 41.3
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 7.4e-135 485.3 682 43.0
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 2.6e-132 476.9 686 41.7
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.1e-130 471.5 706 41.4
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 3.6e-129 466.5 681 41.6
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.6e-129 466.5 696 40.8
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 4.7e-129 466.1 694 41.2
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.1e-129 465.7 694 41.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 4.4e-127 459.5 685 41.5
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 9.7e-127 458.4 689 40.3
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.3e-126 458.0 674 41.8
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 4.8e-126 456.1 726 39.8
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.1e-125 454.9 674 41.4
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 3.1e-125 453.4 683 41.1
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 3.1e-125 453.4 687 40.6
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.6e-124 451.1 674 41.8
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.3e-123 448.0 665 40.5
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 2.9e-123 446.8 714 39.6
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 7.2e-122 442.2 697 41.0
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.6e-121 441.0 682 40.5
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 2.1e-121 440.7 690 39.3
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.0e-120 438.3 676 41.4
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 5.2e-120 436.0 685 40.6
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.6e-119 433.7 699 40.3
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 2.2e-118 430.6 677 39.1
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.8e-118 430.3 679 39.0
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 1.6e-116 424.5 571 44.1
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.0e-115 421.8 667 37.8
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 7.2e-114 415.6 692 40.5
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 8.0e-113 412.1 555 43.4
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 5.2e-112 409.5 679 38.1
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 8.8e-112 408.7 711 37.7
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 2.0e-111 407.5 689 38.5
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 8.3e-110 402.1 737 37.9
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 4.1e-109 399.8 696 38.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 3.5e-108 396.7 685 37.8
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 4.5e-108 396.4 665 38.8
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 4.5e-108 396.4 689 38.2
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 2.9e-107 393.7 681 38.2
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.1e-106 391.7 483 42.9
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 7.3e-106 389.0 676 38.5
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.2e-105 388.3 694 38.0
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 5.2e-104 382.9 509 44.0
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.8e-104 382.5 604 40.6
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 6.8e-104 382.5 702 36.5
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 3.4e-103 380.2 682 36.5
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 7.5e-103 379.0 525 42.9
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 4.9e-94 349.7 473 41.4
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.1e-93 348.6 671 36.1
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.9e-93 347.8 668 35.8
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.0e-91 342.0 551 40.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 6.6e-91 339.3 698 34.1
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.5e-90 338.2 691 34.4
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 9.5e-90 335.5 668 35.5
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 1.2e-89 335.1 674 37.5
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 2.8e-89 334.0 397 43.6
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.5e-87 328.2 344 51.5
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 5.8e-87 326.2 490 42.2
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 2.2e-86 324.3 668 34.7
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 8.3e-86 322.4 667 35.7
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.0e-83 315.5 668 34.1
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.3e-83 315.1 525 40.2
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.7e-83 314.7 670 34.8
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 9.5e-82 308.9 696 33.5
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 1.4e-77 295.0 619 35.1
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 9.2e-77 292.4 687 31.1
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 4.6e-76 290.0 621 34.5
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.0e-75 288.9 621 34.5
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.7e-75 288.1 618 34.6
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.2e-73 282.0 690 32.3
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.1e-72 278.9 373 45.3
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 4.4e-71 273.5 757 30.8
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.2e-62 244.6 285 46.0
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 4.9e-62 243.4 454 38.3
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 9.3e-61 239.2 312 43.3
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 3.3e-58 230.7 329 39.8
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 6.4e-54 216.5 380 41.1
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 3.9e-51 207.2 199 53.3
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 6.7e-51 206.5 363 41.3
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.5e-50 205.3 374 39.3
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 1.2e-44 185.7 360 34.2
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.6e-44 185.3 353 36.8
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 2.7e-44 184.5 260 40.4
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 2.3e-43 181.4 251 38.6
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 3.0e-43 181.0 229 45.0
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 5.1e-43 180.3 313 36.1
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.5e-42 178.7 290 35.5
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.0e-40 169.5 285 38.2
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 5.0e-38 163.7 319 33.2
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.0e-35 154.5 372 34.1
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.3e-30 139.0 437 28.8
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 6.5e-30 136.7 296 33.8
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 2.3e-27 128.3 273 36.6
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.8e-22 110.9 134 44.8
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.5e-21 107.1 152 45.4
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.1e-16 92.8 180 37.2
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.8e-16 92.0 257 32.3
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 7.5e-10 70.1 51 58.8
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 7.5e-10 70.1 113 41.6
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 8.2e-09 66.6 169 33.7
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.3e-08 63.9 149 36.2
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 8.5e-06 56.6 32 71.9
Thecc.08G119300 Theobroma cacao HOM05D004492 ORTHO05D005602 8.5e-06 56.6 196 25.0


User provided reference genes

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