Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 7.6e-222 773.5 376 100.0
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.4e-215 752.7 376 97.9
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 5.1e-186 654.4 376 83.5
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.1e-172 610.1 371 79.8
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.5e-153 546.6 360 73.1
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 7.5e-153 544.3 367 71.7
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.3e-152 543.5 358 70.7
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.7e-152 543.1 363 70.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 3.7e-152 542.0 351 72.6
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 4.9e-152 541.6 353 72.2
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 6.3e-152 541.2 353 72.5
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 8.3e-152 540.8 351 69.5
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.1e-151 540.4 390 67.9
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-149 533.5 362 69.6
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.7e-149 533.1 357 70.3
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.9e-148 529.6 350 69.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 7.2e-148 527.7 351 68.1
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.3e-146 522.7 351 68.7
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 2.0e-145 519.6 353 68.8
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.6e-145 519.2 362 67.4
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 9.8e-145 517.3 351 68.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.3e-144 516.9 356 67.7
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.2e-144 516.2 353 69.7
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.9e-144 515.0 351 68.4
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.1e-143 513.8 356 69.1
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.8e-143 513.1 353 69.7
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 4.1e-143 511.9 353 67.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 9.2e-143 510.8 357 67.5
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 9.2e-143 510.8 352 69.9
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 4.6e-142 508.4 353 67.1
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 4.6e-142 508.4 353 68.0
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 7.8e-142 507.7 351 67.5
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 7.8e-142 507.7 353 67.1
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.0e-141 507.3 353 67.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.3e-141 506.9 330 72.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 2.5e-140 502.7 350 67.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 2.5e-140 502.7 351 67.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.2e-139 500.4 351 65.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.1e-139 499.6 351 66.7
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.4e-138 496.9 351 65.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.4e-138 496.9 355 66.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 3.1e-138 495.7 415 58.3
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-136 490.3 415 57.3
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 4.9e-136 488.4 351 64.1
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.1e-135 487.3 452 55.8
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.0e-134 483.0 354 64.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 6.0e-134 481.5 351 63.8
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 5.0e-133 478.4 351 63.8
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 2.5e-132 476.1 353 62.3
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.5e-132 476.1 351 63.2
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 6.8e-130 468.0 313 68.7
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 3.4e-129 465.7 353 61.2
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.4e-129 465.7 354 61.3
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 3.7e-128 462.2 351 62.4
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 4.9e-128 461.8 354 61.6
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 9.9e-121 437.6 356 59.6
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 9.9e-121 437.6 352 59.4
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.9e-121 437.6 352 59.4
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.2e-120 436.4 352 59.1
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.1e-119 434.1 353 61.2
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.4e-119 433.0 500 48.4
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.5e-116 423.7 456 50.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 8.1e-115 417.9 353 60.1
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 6.8e-114 414.8 285 70.2
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 2.8e-91 339.7 361 46.5
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 8.1e-91 338.2 293 56.7
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.1e-87 327.8 357 45.9
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.9e-85 319.3 344 54.7
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.8e-83 313.2 197 71.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 8.2e-83 311.6 191 71.2
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.2e-78 297.7 228 60.1
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 4.6e-70 269.2 213 63.4
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 4.5e-65 252.7 167 68.3
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.4e-63 247.7 147 76.2
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 2.1e-62 243.8 233 53.2
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 4.1e-58 229.6 249 50.2
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.5e-57 226.5 356 36.5
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 7.2e-55 218.8 140 73.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 4.2e-47 193.0 163 60.7
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.2e-43 180.6 427 30.0
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 8.0e-38 162.2 116 66.4
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 9.8e-36 155.2 128 62.5
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.7e-35 154.5 395 30.1
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.4e-28 129.8 109 54.1
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.7e-27 127.9 103 66.0
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.9e-27 127.1 108 55.6
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 9.2e-26 122.1 70 72.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 9.2e-26 122.1 70 72.9
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 9.2e-26 122.1 70 68.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.7e-25 120.6 106 59.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.5e-23 114.8 69 69.6
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.7e-22 109.8 117 53.0
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.4e-21 108.2 292 28.1
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.7e-19 100.1 67 73.1
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.9e-19 99.8 67 71.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.4e-18 98.2 67 71.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.1e-18 96.7 67 71.6
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.8e-17 92.4 96 44.8
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 7.8e-17 92.4 58 70.7
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.3e-15 87.0 57 71.9
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.2e-14 82.8 49 63.3
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.3e-13 80.9 53 75.5
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 9.8e-12 75.5 73 50.7
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.4e-11 72.8 49 59.2
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 5.1e-08 63.2 119 38.7
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 2.5e-07 60.8 94 39.4
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 5.6e-07 59.7 55 54.5


User provided reference genes

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