Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 3.0e-145 518.5 255 100.0
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.3e-140 503.1 255 97.3
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 2.8e-127 458.8 257 89.1
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 1.7e-116 422.9 256 84.0
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.0e-113 413.7 255 80.8
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 2.3e-105 386.0 250 78.4
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 5.1e-105 384.8 243 76.5
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.5e-104 383.3 240 80.8
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 7.4e-104 380.9 200 90.0
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 7.4e-104 380.9 250 75.6
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 7.4e-104 380.9 250 76.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 1.7e-103 379.8 254 74.4
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 6.3e-103 377.9 220 82.7
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 6.3e-103 377.9 217 82.9
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 8.2e-103 377.5 257 73.5
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.4e-102 376.7 248 76.2
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.4e-102 376.7 213 83.1
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.8e-102 376.3 242 78.1
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.4e-102 375.9 246 75.6
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.4e-102 375.9 245 76.3
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 2.4e-102 375.9 256 72.7
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.4e-102 375.9 220 81.8
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 3.1e-102 375.6 243 77.8
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 4.1e-102 375.2 242 77.7
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 4.1e-102 375.2 248 76.6
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 7.0e-102 374.4 240 76.7
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 7.0e-102 374.4 246 76.0
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 7.0e-102 374.4 242 77.7
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 9.1e-102 374.0 248 76.2
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 1.2e-101 373.6 245 75.1
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 3.5e-101 372.1 254 75.2
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 3.5e-101 372.1 245 75.5
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 4.5e-101 371.7 214 82.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 5.9e-101 371.3 247 74.1
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 5.9e-101 371.3 253 74.3
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.3e-100 370.2 251 74.1
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.7e-100 369.8 248 74.6
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 2.2e-100 369.4 286 67.8
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 3.8e-100 368.6 256 72.3
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 3.8e-100 368.6 246 74.8
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 3.8e-100 368.6 197 87.3
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 6.5e-100 367.9 253 71.5
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.1e-99 367.1 244 73.8
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.1e-99 367.1 247 74.1
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.5e-99 366.7 239 77.0
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 3.2e-99 365.5 207 83.1
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 5.5e-99 364.8 206 83.5
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 1.6e-98 363.2 252 73.0
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.7e-98 362.5 238 76.5
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 3.6e-98 362.1 251 72.1
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 4.7e-98 361.7 246 74.8
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 8.0e-98 360.9 255 72.2
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 1.0e-97 360.5 232 76.7
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.8e-97 359.8 199 85.4
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 3.0e-97 359.0 238 74.8
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 3.9e-97 358.6 194 85.1
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 3.9e-97 358.6 252 71.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 6.7e-97 357.8 226 77.0
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 6.7e-97 357.8 197 84.3
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.1e-96 357.1 203 80.3
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.5e-96 356.7 220 77.7
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 2.0e-96 356.3 229 77.7
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 4.4e-96 355.1 220 77.7
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 7.4e-96 354.4 233 73.4
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.3e-95 353.6 253 71.9
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.7e-95 353.2 229 76.4
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 6.3e-95 351.3 203 82.8
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 8.2e-95 350.9 223 76.2
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 3.1e-94 349.0 209 77.5
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.6e-93 345.9 195 82.6
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 4.5e-93 345.1 195 82.6
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.9e-93 344.7 202 78.7
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.7e-92 343.2 228 76.8
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 8.5e-92 340.9 255 68.6
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 5.5e-91 338.2 253 68.4
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.4e-89 333.6 242 71.1
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 2.3e-89 332.8 193 78.8
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 1.3e-87 327.0 233 71.2
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 1.2e-85 320.5 207 77.3
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.0e-85 319.7 242 69.0
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.2e-84 316.2 270 63.7
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 5.0e-84 315.1 245 68.6
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.7e-82 309.3 193 73.1
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.7e-82 309.3 185 76.2
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 8.0e-82 307.8 200 74.0
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 6.8e-81 304.7 192 73.4
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 6.8e-81 304.7 250 65.2
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 4.4e-80 302.0 199 74.4
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.7e-76 290.0 176 72.2
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 1.7e-76 290.0 204 73.5
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 2.9e-76 289.3 183 72.1
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 2.8e-74 282.7 242 62.4
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.7e-71 273.5 262 59.2
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 5.4e-70 268.5 226 62.4
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.3e-68 263.8 141 90.1
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 5.2e-65 251.9 147 79.6
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.0e-60 237.7 137 83.9
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.3e-60 236.5 247 55.5
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.5e-59 233.0 247 55.9
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 9.8e-56 221.1 172 60.5
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 3.5e-53 212.6 198 57.1
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 4.6e-53 212.2 198 53.0
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 2.3e-49 199.9 200 55.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 5.4e-46 188.7 163 60.7
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 3.3e-43 179.5 103 78.6
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.8e-41 173.7 149 53.7
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 6.8e-41 171.8 105 77.1
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 3.9e-28 129.4 71 88.7
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 3.1e-25 119.8 214 39.7
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.5e-24 117.5 77 72.7
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 7.6e-16 88.6 74 63.5


User provided reference genes

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