Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g026410 Solanum pennellii HOM05D000007 ORTHO05D000039 5.5e-95 350.9 169 100.0
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-39 167.2 152 57.9
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 3.6e-38 162.2 152 56.6
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 8.0e-38 161.0 152 58.6
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.2e-37 158.3 152 55.9
Solyc04g063400.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.7e-36 154.8 144 56.9
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 5.7e-36 154.8 150 54.0
PGSC0003DMG400037627 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.8e-36 154.1 136 61.8
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 6.3e-35 151.4 150 53.3
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 6.3e-35 151.4 150 53.3
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-34 150.6 152 53.9
Sopen04g026380 Solanum pennellii HOM05D000007 ORTHO05D000039 1.2e-33 147.1 152 50.7
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 2.0e-33 146.4 125 63.2
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.5e-33 145.6 152 53.9
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 4.5e-33 145.2 152 52.6
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.9e-33 144.8 151 54.3
Solyc04g064450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 7.8e-33 144.4 152 52.0
PGSC0003DMG400039355 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.0e-32 144.1 136 58.8
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-32 143.7 149 54.4
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.9e-31 139.8 151 52.3
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.3e-31 139.0 150 52.7
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.7e-30 135.2 146 50.7
PGSC0003DMG400038531 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.8e-29 131.3 99 68.7
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 1.9e-26 123.2 140 47.9
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.3e-23 112.5 82 68.3
PGSC0003DMG400024835 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.3e-23 112.5 105 58.1
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 4.0e-21 105.5 147 41.5
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 2.2e-19 99.8 148 42.6
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.9e-19 98.6 136 38.2
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-18 97.4 159 37.7
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.9e-18 96.7 143 38.5
PGSC0003DMG400045617 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.9e-18 96.7 141 38.3
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.2e-18 95.9 146 41.1
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.6e-17 93.6 146 39.7
Peaxi162Scf00033g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-15 87.0 148 35.8
PGSC0003DMG400013031 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.3e-15 85.5 147 36.1
Nitab4.5_0000174g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.6e-15 85.1 121 43.8
Nitab4.5_0010416g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.1e-14 83.2 147 38.8
PGSC0003DMG400030753 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.1e-14 83.2 153 33.3
Sopen06g019900 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-13 80.9 147 34.0
Nitab4.5_0001821g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.2e-13 78.6 144 36.8
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 6.8e-13 78.2 155 32.3
Solyc06g059820.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.8e-12 75.1 153 31.4
Sopen06g019890 Solanum pennellii HOM05D000007 ORTHO05D000039 5.8e-12 75.1 154 31.2
PGSC0003DMG400030752 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.8e-12 75.1 111 36.0
CAN.G319.8 Capsicum annuum HOM05D000007 ORTHO05D000039 9.9e-12 74.3 92 40.2
CAN.G46.1 Capsicum annuum HOM05D000007 ORTHO05D000039 2.9e-11 72.8 75 53.3
Solyc04g064460.2 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.7e-11 72.4 80 45.0
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 2.4e-10 69.7 144 38.2
Peaxi162Scf00037g00084 Petunia axillaris HOM05D000007 ORTHO05D000039 2.4e-10 69.7 145 33.8
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 3.2e-10 69.3 144 37.5
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 4.1e-10 68.9 134 34.3
Peaxi162Scf00033g00025 Petunia axillaris HOM05D000007 ORTHO05D000039 5.4e-10 68.6 98 37.8
Peaxi162Scf00033g00031 Petunia axillaris HOM05D000007 ORTHO05D000039 5.4e-10 68.6 146 32.9
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 9.2e-10 67.8 140 37.9
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.3e-08 63.9 136 32.4
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.1e-08 62.0 156 28.8
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 6.6e-08 61.6 150 29.3
Nitab4.5_0020718g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.5e-07 59.7 88 39.8
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 3.3e-07 59.3 144 36.8
Lj5C836T5 Lonicera japonica HOM05D000007 ORTHO05D000039 7.3e-07 58.2 169 29.0
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-06 57.4 140 29.3
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-06 56.6 140 29.3
Cfa000448 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.8e-06 56.2 145 27.6
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.1e-06 54.7 141 30.5
Cfa017236 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.1e-06 54.7 129 32.6
Ciclev10027197m.g Citrus clementina HOM05D000007 ORTHO05D000039 8.1e-06 54.7 124 28.2
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 8.1e-06 54.7 168 28.6


User provided reference genes

Program Settings