Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g025910 Solanum pennellii HOM05D002160 ORTHO05D002012 8.8e-26 119.8 73 100.0
Solyc04g058100.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 4.4e-25 117.5 73 98.6
Solyc04g058150.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 5.5e-20 100.5 73 86.3
Sopen04g026050 Solanum pennellii HOM05D002160 ORTHO05D002012 5.5e-20 100.5 73 86.3
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 2.6e-17 91.7 78 71.8
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 4.4e-17 90.9 76 73.7
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 2.8e-16 88.2 78 69.2
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 6.3e-16 87.0 75 78.7
Sopen06g032540 Solanum pennellii HOM05D002160 ORTHO05D002012 8.3e-16 86.7 78 76.9
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 4.1e-15 84.3 74 77.0
Peaxi162Scf00774g00011 Petunia axillaris HOM05D002160 ORTHO05D002012 1.2e-14 82.8 78 75.6
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-13 79.0 78 65.4
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-13 79.0 78 65.4
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-13 79.0 78 65.4
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.7e-13 79.0 75 73.3
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.9e-13 77.8 99 54.5
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 8.6e-13 76.6 78 64.1
Nitab4.5_0022803g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 9.5e-12 73.2 75 68.0
Solyc06g005465.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 2.1e-11 72.0 78 64.1
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 4.0e-10 67.8 79 54.4
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 6.8e-10 67.0 77 53.2
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 8.9e-10 66.6 79 58.2
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 8.9e-10 66.6 79 59.5
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 8.9e-10 66.6 79 57.0
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 8.9e-10 66.6 78 57.7
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 1.5e-09 65.9 78 59.0
CAN.G111.42 Capsicum annuum HOM05D002160 ORTHO05D002012 2.0e-09 65.5 78 60.3
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 3.4e-09 64.7 78 56.4
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 5.8e-09 63.9 78 57.7
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 9.8e-09 63.2 79 57.0
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 9.8e-09 63.2 77 50.6
Sopen06g001440 Solanum pennellii HOM05D002160 ORTHO05D002012 9.8e-09 63.2 78 59.0
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 1.3e-08 62.8 73 57.5
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 3.7e-08 61.2 75 44.0
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 6.4e-08 60.5 76 55.3
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.4e-07 59.3 77 57.1
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 1.9e-07 58.9 52 69.2
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 3.2e-07 58.2 76 53.9
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 4.1e-07 57.8 69 56.5
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 7.0e-07 57.0 67 58.2
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 9.2e-07 56.6 76 56.6
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 1.2e-06 56.2 67 58.2
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.6e-06 55.8 69 56.5
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 1.6e-06 55.8 76 51.3
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 2.7e-06 55.1 67 56.7
Nitab4.5_0003635g0040 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.5e-06 54.7 66 43.9


User provided reference genes

Program Settings