Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 7.1e-108 394.0 212 100.0
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 6.0e-107 391.0 212 97.2
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 2.5e-105 385.6 212 97.6
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 2.9e-101 372.1 212 91.5
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 2.5e-97 359.0 213 89.2
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 4.3e-97 358.2 213 90.1
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 1.4e-95 353.2 213 87.3
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 2.7e-83 312.4 214 74.8
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 6.9e-79 297.7 214 71.5
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 3.4e-78 295.4 216 70.8
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 1.9e-76 289.7 210 70.5
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 4.2e-76 288.5 209 70.8
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 5.4e-76 288.1 218 68.3
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 9.3e-76 287.3 211 70.1
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 9.3e-76 287.3 201 78.1
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 1.2e-75 287.0 210 75.2
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 3.5e-75 285.4 210 70.5
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 2.3e-74 282.7 213 75.1
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 4.3e-73 278.5 217 68.2
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 5.6e-73 278.1 196 70.4
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 2.1e-72 276.2 207 68.6
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 2.8e-72 275.8 211 68.2
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 8.1e-72 274.2 205 73.2
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 8.1e-72 274.2 207 67.6
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 8.1e-72 274.2 210 74.3
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.1e-71 273.9 211 71.1
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 1.1e-71 273.9 211 71.1
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 1.4e-71 273.5 212 70.8
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.8e-71 273.1 211 70.6
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 5.3e-71 271.6 214 71.0
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 6.9e-71 271.2 212 65.6
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.5e-70 270.0 203 74.9
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.5e-70 270.0 213 70.0
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 2.6e-70 269.2 211 67.8
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 3.4e-70 268.9 205 69.3
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 3.4e-70 268.9 205 69.3
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 3.4e-70 268.9 189 78.8
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 4.5e-70 268.5 210 65.7
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.7e-69 266.5 205 68.8
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 2.2e-69 266.2 217 71.4
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.9e-69 265.8 209 63.6
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 3.8e-69 265.4 214 66.4
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 4.9e-69 265.0 216 64.8
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 4.9e-69 265.0 216 64.8
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 6.5e-69 264.6 213 70.0
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.1e-68 263.8 205 69.3
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 1.1e-68 263.8 215 70.7
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.9e-68 263.1 209 65.1
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 2.5e-68 262.7 206 66.0
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 9.3e-68 260.8 213 67.1
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 9.3e-68 260.8 209 63.6
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 9.3e-68 260.8 212 66.0
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-67 260.4 138 87.7
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 1.6e-67 260.0 212 71.2
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.1e-67 259.6 193 68.9
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 2.1e-67 259.6 205 71.7
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 6.0e-67 258.1 214 63.1
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 7.9e-67 257.7 212 63.2
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 1.0e-66 257.3 211 63.5
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 3.9e-66 255.4 208 64.4
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 3.3e-65 252.3 203 70.0
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 9.6e-65 250.8 209 61.2
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.6e-64 250.0 203 65.5
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 6.2e-64 248.1 207 63.8
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 5.3e-63 245.0 209 68.4
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 1.5e-62 243.4 202 62.4
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 1.5e-62 243.4 205 70.2
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 2.0e-62 243.0 211 63.5
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 3.4e-62 242.3 212 63.2
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 1.3e-61 240.4 134 84.3
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.7e-61 240.0 208 61.1
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.9e-61 239.2 212 63.2
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 2.9e-61 239.2 201 63.7
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 6.5e-61 238.0 134 84.3
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 8.4e-61 237.7 202 67.3
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 2.5e-60 236.1 134 82.8
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.5e-60 236.1 184 67.9
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 3.2e-60 235.7 201 63.2
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.2e-60 235.7 228 59.2
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 7.2e-60 234.6 204 59.8
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 7.2e-60 234.6 203 60.6
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.2e-59 233.8 134 81.3
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 1.2e-59 233.8 204 59.8
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.1e-59 233.0 204 59.3
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 2.1e-59 233.0 204 59.3
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 4.6e-59 231.9 204 59.3
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.3e-58 229.6 202 59.9
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 2.3e-58 229.6 192 69.3
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 3.9e-58 228.8 202 59.9
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.9e-57 226.5 134 80.6
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 3.3e-57 225.7 144 75.7
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 7.4e-57 224.6 174 71.8
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 9.7e-57 224.2 125 83.2
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.7e-56 222.2 205 60.5
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 2.9e-53 212.6 127 78.0
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 9.4e-52 207.6 132 73.5
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 1.4e-50 203.8 200 56.5
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 1.6e-43 180.3 134 65.7
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 3.6e-43 179.1 152 69.7
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 6.1e-43 178.3 122 66.4
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.1e-41 174.1 136 61.0
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 9.1e-39 164.5 134 64.2
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 1.0e-37 161.0 112 66.1
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.9e-37 159.5 139 54.0
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 4.7e-35 152.1 177 49.2
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 6.1e-35 151.8 90 81.1
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 3.7e-32 142.5 208 43.8
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.1e-31 139.4 134 59.0
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 2.2e-21 106.7 109 52.3
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 1.5e-20 104.0 77 66.2
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 5.7e-17 92.0 135 45.2


User provided reference genes

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