Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 1.6e-76 290.0 243 100.0
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 7.7e-58 228.0 137 97.1
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 2.6e-45 186.4 135 78.5
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 8.0e-23 111.7 93 58.1
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 1.0e-22 111.3 93 58.1
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 1.3e-17 94.4 88 50.0
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 2.3e-17 93.6 95 50.5
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 6.6e-17 92.0 88 48.9
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 2.8e-15 86.7 91 49.5
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 4.7e-15 85.9 75 50.7
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 6.1e-15 85.5 95 51.6
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 8.0e-15 85.1 75 50.7
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 6.8e-14 82.0 93 46.2
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 5.8e-13 79.0 93 41.9
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 2.9e-12 76.6 86 46.5
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 2.9e-12 76.6 86 46.5
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 2.9e-12 76.6 88 42.0
PGSC0003DMG400045401 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.9e-11 73.9 95 38.9
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 2.4e-11 73.6 107 38.3
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 3.2e-11 73.2 83 45.8
Solyc06g075870.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 1.2e-10 71.2 71 43.7
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 1.2e-10 71.2 71 43.7
PGSC0003DMG400034401 Solanum tuberosum HOM05D008565 ORTHO05D018131 1.6e-10 70.9 88 45.5
CAN.G394.31 Capsicum annuum HOM05D008565 ORTHO05D011266 2.7e-10 70.1 98 38.8
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 2.7e-10 70.1 102 38.2
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 6.0e-10 68.9 86 39.5
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 6.0e-10 68.9 84 42.9
PGSC0003DMG400035336 Solanum tuberosum HOM05D008565 ORTHO05D018131 1.3e-09 67.8 83 45.8
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 1.5e-08 64.3 88 39.8
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 2.5e-08 63.5 74 36.5
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 5.6e-08 62.4 74 36.5
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 5.6e-08 62.4 81 38.3
PGSC0003DMG400045046 Solanum tuberosum HOM05D008565 ORTHO05D017126 7.3e-08 62.0 93 36.6
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 9.5e-08 61.6 92 33.7
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 1.2e-07 61.2 83 38.6
CiPaw.14G071600 Carya illinoinensis HOM05D010595 ORTHO05D011290 1.2e-07 61.2 72 34.7
PGSC0003DMG400039648 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.2e-07 61.2 97 36.1
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.6e-07 59.7 74 40.5
CAN.G394.27 Capsicum annuum HOM05D008565 ORTHO05D011266 1.4e-06 57.8 74 40.5
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.8e-06 57.4 82 37.8
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 2.3e-06 57.0 68 45.6
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 3.1e-06 56.6 89 38.2
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 3.1e-06 56.6 68 41.2
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 8.9e-06 55.1 66 42.4
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 8.9e-06 55.1 68 39.7


User provided reference genes

Program Settings