Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 1.5e-83 312.8 152 100.0
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.4e-46 189.9 150 67.3
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-42 176.0 183 54.1
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 8.0e-37 157.5 183 49.2
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 8.8e-36 154.1 186 48.4
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-35 150.6 196 43.9
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.3e-34 147.9 183 45.4
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.1e-33 147.1 178 47.8
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-33 147.1 198 42.4
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-33 147.1 183 45.4
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-33 146.7 181 45.3
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-33 146.4 139 55.4
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-31 140.2 196 41.8
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-31 139.8 182 46.2
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-31 138.3 181 43.1
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-30 135.2 185 43.8
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-30 134.8 188 42.0
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-29 131.7 184 41.8
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-27 125.9 156 43.6
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-27 124.8 166 42.8
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-26 123.6 168 43.5
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-26 122.5 177 41.8
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-25 120.6 159 42.8
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-25 120.2 124 54.8
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-25 119.0 182 38.5
Nitab4.5_0008766g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-23 112.5 95 57.9
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-22 108.6 185 38.4
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-22 108.6 118 51.7
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-22 108.2 134 43.3
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-22 108.2 150 43.3
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-22 107.8 134 43.3
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-21 106.7 76 69.7
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-20 103.2 118 50.0
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-20 102.1 89 57.3
Nitab4.5_0007229g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-20 102.1 65 73.8
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.8e-20 101.3 87 57.5
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-19 99.0 104 51.0
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-19 98.2 76 61.8
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-19 97.4 136 44.1
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-19 97.4 124 42.7
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-17 93.6 124 42.7
Nitab4.5_0003339g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-17 92.8 65 69.2
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-17 92.0 76 61.8
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-17 91.7 225 30.2
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.2e-17 90.9 119 42.9
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-16 90.1 110 46.4
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-16 89.4 115 41.7
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-16 89.0 65 64.6
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.5e-16 88.6 124 42.7
Nitab4.5_0004688g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-16 88.2 66 65.2
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-16 87.8 118 44.9
Nitab4.5_0002459g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-15 85.5 95 52.6
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-15 85.1 57 61.4
Nitab4.5_0002530g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-15 84.7 93 48.4
Nitab4.5_0008623g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-14 84.0 67 59.7
Nitab4.5_0000577g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-14 83.2 65 66.2
Nitab4.5_0008635g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-14 82.8 50 76.0
Nitab4.5_0001130g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-14 81.6 65 61.5
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-14 81.6 52 69.2
Peaxi162Scf00032g00919 Petunia axillaris HOM05D001309 ORTHO05D000385 5.6e-14 81.6 50 72.0
Nitab4.5_0008584g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-13 80.5 65 61.5
Nitab4.5_0015781g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-13 80.5 60 65.0
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-13 79.7 79 46.8
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.6e-13 79.0 153 30.7
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 4.7e-13 78.6 153 30.7
Nitab4.5_0005765g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.0e-13 77.8 51 70.6
Nitab4.5_0007152g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.0e-13 77.8 100 39.0
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.0e-12 77.4 186 29.6
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 6.8e-12 74.7 187 29.4
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 6.8e-12 74.7 187 29.4
Peaxi162Scf00524g00007 Petunia axillaris HOM05D001309 ORTHO05D000385 6.8e-12 74.7 48 70.8
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.2e-11 73.9 186 30.6
PGSC0003DMG400046524 Solanum tuberosum HOM05D001309 ORTHO05D000385 1.5e-11 73.6 70 54.3
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.5e-11 73.6 121 37.2
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 2.0e-11 73.2 187 28.9
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.6e-11 72.8 202 29.2
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-11 72.4 88 42.0
Nitab4.5_0000440g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-11 71.6 65 58.5
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 9.8e-11 70.9 187 28.3
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-10 70.5 91 38.5
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.7e-10 70.1 187 27.8
Nitab4.5_0001199g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-10 70.1 68 51.5
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.9e-10 69.3 203 28.1
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 2.9e-10 69.3 187 28.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.7e-10 68.9 186 29.0
Solyc04g150152.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 3.7e-10 68.9 37 86.5
Nitab4.5_0005558g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.3e-10 67.8 45 66.7
Solyc10g049515.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 8.3e-10 67.8 40 77.5
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-09 67.4 83 41.0
Nitab4.5_0026778g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-09 67.4 61 59.0
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.4e-09 67.0 134 32.8
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 2.4e-09 66.2 121 35.5
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.4e-09 66.2 188 26.6
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 2.4e-09 66.2 186 26.9
Nitab4.5_0002419g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-09 66.2 65 52.3
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.2e-09 65.9 55 54.5
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 7.0e-09 64.7 118 29.7
Nitab4.5_0001388g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-08 63.9 72 48.6
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 1.2e-08 63.9 186 28.0
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-08 63.2 84 40.5
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-08 63.2 89 39.3
Solyc04g150151.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 2.7e-08 62.8 39 79.5
Nitab4.5_0006526g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-08 62.4 43 65.1
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.6e-08 62.0 184 28.3
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 5.9e-08 61.6 118 27.1
Nitab4.5_0003433g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-08 61.6 113 32.7
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 7.8e-08 61.2 85 35.3
Hund10707 Selenicereus undatus HOM05D006468 ORTHO05D006908 1.0e-07 60.8 117 28.2
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-07 60.5 152 28.3
Nitab4.5_0006915g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-07 60.5 91 37.4
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-07 59.7 189 24.9
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-07 59.7 78 42.3
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 2.3e-07 59.7 91 34.1
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 3.0e-07 59.3 65 44.6
Hund23750 Selenicereus undatus HOM05D006468 ORTHO05D006908 3.0e-07 59.3 117 27.4
Hund24050 Selenicereus undatus HOM05D006468 ORTHO05D006908 3.0e-07 59.3 117 27.4
Hund04850 Selenicereus undatus HOM05D006468 ORTHO05D006908 3.9e-07 58.9 117 27.4
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.9e-07 58.9 86 32.6
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 5.0e-07 58.5 176 26.1
Nitab4.5_0000261g0180 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-07 58.5 35 74.3
Hund08276 Selenicereus undatus HOM05D006468 ORTHO05D006908 6.6e-07 58.2 117 27.4
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 8.6e-07 57.8 119 29.4
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.1e-06 57.4 184 23.4
Nitab4.5_0005502g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-06 56.6 34 73.5
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-06 56.2 91 36.3
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 2.5e-06 56.2 147 25.9
Hund10415 Selenicereus undatus HOM05D006468 ORTHO05D006908 2.5e-06 56.2 117 26.5
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.3e-06 55.5 120 30.8
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-06 55.5 159 28.3
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 5.6e-06 55.1 120 27.5
Nitab4.5_0008994g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-06 55.1 65 50.8
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 5.6e-06 55.1 124 24.2
Zm00001eb181050 Zea mays HOM05D008576 ORTHO05D000385 5.6e-06 55.1 94 28.7
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 7.3e-06 54.7 62 40.3
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 7.3e-06 54.7 146 22.6
Nitab4.5_0000789g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-06 54.7 32 78.1
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.5e-06 54.3 91 34.1
TAR371G0826 Trochodendron aralioides HOM05D002643 ORTHO05D000385 9.5e-06 54.3 104 28.8


User provided reference genes

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