Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 7.3e-138 493.8 236 100.0
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 7.3e-138 493.8 236 100.0
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 4.4e-135 484.6 236 98.3
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 2.1e-132 475.7 236 95.8
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 1.2e-129 466.5 236 93.6
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 1.6e-129 466.1 236 94.1
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.8e-118 428.3 230 84.8
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 7.1e-117 424.1 230 84.3
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 1.6e-116 422.9 235 81.3
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.1e-116 422.5 233 83.3
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 3.5e-116 421.8 228 83.3
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 6.0e-116 421.0 233 83.7
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 1.3e-115 419.9 231 82.3
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 3.9e-115 418.3 231 82.3
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 6.6e-115 417.5 229 83.8
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 8.7e-115 417.2 228 83.8
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.6e-113 412.9 230 80.4
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 2.8e-113 412.1 235 81.3
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 3.6e-113 411.8 230 80.4
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 6.2e-113 411.0 230 80.4
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 6.2e-113 411.0 230 79.6
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 8.1e-113 410.6 230 79.1
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 1.1e-112 410.2 229 79.0
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 1.4e-112 409.8 229 79.9
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.4e-112 409.8 230 80.9
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 2.4e-112 409.1 230 79.6
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 3.1e-112 408.7 230 80.0
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.2e-111 406.8 259 74.9
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 1.5e-111 406.4 230 79.1
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 2.6e-111 405.6 230 78.7
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 4.4e-111 404.8 229 80.3
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 4.4e-111 404.8 230 78.3
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 4.4e-111 404.8 230 79.1
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 5.8e-111 404.4 230 78.7
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 7.6e-111 404.1 230 78.3
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 9.9e-111 403.7 228 78.9
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 9.9e-111 403.7 228 78.9
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 2.2e-110 402.5 231 77.9
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 2.9e-110 402.1 229 79.5
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 3.8e-110 401.7 229 78.2
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 4.9e-110 401.4 229 79.5
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 6.4e-110 401.0 229 79.0
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 6.4e-110 401.0 229 78.6
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 6.4e-110 401.0 229 79.5
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 8.4e-110 400.6 229 79.0
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 8.4e-110 400.6 229 78.6
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 8.4e-110 400.6 229 79.5
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 4.2e-109 398.3 229 77.7
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 5.4e-109 397.9 228 77.2
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 5.4e-109 397.9 228 77.2
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 5.4e-109 397.9 236 75.8
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 7.1e-109 397.5 230 76.5
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 7.1e-109 397.5 231 79.2
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 9.3e-109 397.1 229 77.7
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 1.2e-108 396.7 230 77.4
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 1.6e-108 396.4 228 77.6
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 2.1e-108 396.0 230 77.0
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 2.1e-108 396.0 229 76.4
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 3.5e-108 395.2 221 79.6
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 3.5e-108 395.2 230 77.4
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 7.8e-108 394.0 230 77.8
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 2.3e-107 392.5 228 76.8
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 3.0e-107 392.1 229 81.7
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 5.1e-107 391.3 229 76.4
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 6.6e-107 391.0 230 75.7
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-106 390.2 229 76.0
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-106 390.2 229 76.0
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 1.1e-106 390.2 229 76.4
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 1.5e-106 389.8 261 69.7
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 3.3e-106 388.7 234 73.9
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 9.6e-106 387.1 230 75.7
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 3.6e-105 385.2 230 74.3
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 6.2e-105 384.4 230 74.3
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 1.4e-104 383.3 234 71.8
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 1.5e-103 379.8 228 72.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 4.5e-103 378.3 228 74.1
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 4.5e-103 378.3 228 74.1
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 5.8e-103 377.9 228 73.7
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 5.8e-103 377.9 228 73.7
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 5.8e-103 377.9 228 73.2
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 5.8e-103 377.9 228 73.2
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 7.6e-103 377.5 228 72.4
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 7.6e-103 377.5 228 73.7
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 2.2e-102 375.9 226 74.8
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 2.9e-102 375.6 232 72.0
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 6.4e-102 374.4 234 71.4
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 6.4e-102 374.4 228 72.4
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 8.4e-102 374.0 234 70.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.4e-101 373.2 251 72.5
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 3.5e-100 368.6 227 71.4
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 5.1e-99 364.8 229 79.0
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 6.7e-99 364.4 252 66.7
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 8.7e-99 364.0 229 70.3
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 3.3e-98 362.1 259 64.9
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 1.8e-96 356.3 228 68.9
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 8.4e-94 347.4 229 70.7
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 4.2e-93 345.1 229 70.3
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 9.3e-93 344.0 226 65.5
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 1.2e-92 343.6 230 64.8
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 2.1e-92 342.8 195 78.5
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 8.7e-91 337.4 260 63.1
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 8.7e-91 337.4 229 67.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 1.9e-90 336.3 177 85.9
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.8e-83 313.2 212 71.7
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 3.9e-83 312.0 234 65.0
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 1.9e-82 309.7 222 61.7
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 2.2e-81 306.2 169 78.7
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.4e-80 302.8 175 76.0
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 3.1e-80 302.4 169 87.0
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 2.6e-79 299.3 235 57.9
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 5.0e-78 295.0 220 60.9
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 6.5e-78 294.7 165 78.8
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 1.2e-76 290.4 258 51.9
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 6.1e-76 288.1 229 55.5
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 2.5e-74 282.7 202 65.3
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.7e-73 280.0 144 86.1
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 3.8e-70 268.9 151 75.5
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 5.7e-66 255.0 278 50.7
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 8.5e-54 214.5 177 58.2
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 7.0e-48 194.9 242 43.0
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 2.7e-47 193.0 122 70.5
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 2.7e-47 193.0 197 48.7
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 9.4e-45 184.5 206 40.8
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 8.0e-44 181.4 164 54.3
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 2.7e-39 166.4 246 35.8
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 2.3e-35 153.3 85 74.1
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.2e-31 141.0 194 43.3
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 5.0e-30 135.6 79 81.0
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 1.5e-26 124.0 119 48.7
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.6e-26 123.2 251 38.2
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.5e-15 86.3 48 81.2
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.9e-13 80.5 41 75.6
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 4.1e-08 62.8 48 62.5
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 5.4e-08 62.4 80 41.2
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 1.0e-06 58.2 40 70.0
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.0e-06 58.2 116 36.2
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 3.0e-06 56.6 62 38.7


User provided reference genes

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