Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g024140 Solanum pennellii HOM05D007801 ORTHO05D009763 4.7e-39 164.1 84 100.0
Solyc04g054340.1 Solanum lycopersicum HOM05D007801 ORTHO05D009763 8.9e-38 159.8 84 97.6
PGSC0003DMG400012798 Solanum tuberosum HOM05D007801 ORTHO05D009763 4.0e-30 134.4 84 86.9
Nitab4.5_0000727g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.2e-26 122.9 87 74.7
Nitab4.5_0004756g0030 Nicotiana tabacum HOM05D007801 ORTHO05D009763 2.0e-26 122.1 87 74.7
Peaxi162Scf00204g00033 Petunia axillaris HOM05D007801 ORTHO05D009763 2.3e-22 108.6 86 69.8
PGSC0003DMG400030102 Solanum tuberosum HOM05D007801 ORTHO05D009763 1.1e-19 99.8 84 67.9
Nitab4.5_0008777g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 2.4e-19 98.6 90 64.4
Peaxi162Scf00611g00068 Petunia axillaris HOM05D007801 ORTHO05D009763 9.2e-19 96.7 87 64.4
Nitab4.5_0006788g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.7e-17 92.4 85 67.1
Peaxi162Scf00295g00003 Petunia axillaris HOM05D007801 ORTHO05D009763 1.1e-16 89.7 86 66.3
Nitab4.5_0000818g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.6e-15 85.9 85 64.7
PGSC0003DMG400016738 Solanum tuberosum HOM05D007801 ORTHO05D009763 1.4e-14 82.8 91 52.7
Peaxi162Scf28863g00002 Petunia axillaris HOM05D007801 ORTHO05D009763 4.0e-14 81.3 80 65.0
Rhsim10G0155300 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.2e-13 79.7 85 57.6
Dinv21964 Davidia involucrata HOM05D007801 ORTHO05D009763 4.4e-13 77.8 78 60.3
Rhsim10G0155500 Rhododendron simsii HOM05D007801 ORTHO05D009763 7.6e-13 77.0 85 56.5
Rhsim10G0155200 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.4e-11 72.8 83 55.4
TAR280G0007 Trochodendron aralioides HOM05D007801 ORTHO05D009763 1.9e-11 72.4 85 55.3
Gohir.D03G044800 Gossypium hirsutum HOM05D007801 ORTHO05D009763 3.5e-10 68.2 84 48.8
Gorai.003G045900 Gossypium raimondii HOM05D007801 ORTHO05D009763 3.5e-10 68.2 84 48.8
Manes.12G139700 Manihot esculenta HOM05D007801 ORTHO05D009763 3.5e-10 68.2 86 51.2
TWI77G0824 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 3.5e-10 68.2 85 47.1
COL.COLO4_11043 Corchorus olitorius HOM05D007801 ORTHO05D009763 1.0e-09 66.6 86 54.7
Gohir.A02G133400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.3e-09 66.2 84 47.6
Duzib264G0602 Durio zibethinus HOM05D007801 ORTHO05D009763 3.9e-09 64.7 86 53.5
Manes.13G088400 Manihot esculenta HOM05D007801 ORTHO05D009763 3.9e-09 64.7 84 45.2
Thecc.01G109200 Theobroma cacao HOM05D007801 ORTHO05D009763 8.7e-09 63.5 86 52.3
Cc07_g15740 Coffea canephora HOM05D007801 ORTHO05D009763 1.1e-08 63.2 90 50.0
QL06p033111 Quercus lobata HOM05D007801 ORTHO05D009763 1.1e-08 63.2 86 47.7
Gohir.D03G044900 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.5e-08 62.8 89 46.1
Gohir.D12G094400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.5e-08 62.8 85 49.4
Gorai.008G102600 Gossypium raimondii HOM05D007801 ORTHO05D009763 1.5e-08 62.8 85 49.4
FAN19G1576 Fragaria x ananassa HOM05D007801 ORTHO05D009763 1.9e-08 62.4 84 52.4
SalBow3G2462 Salvia bowleyana HOM05D007801 ORTHO05D009763 2.5e-08 62.0 84 46.4
FAN28G2811 Fragaria x ananassa HOM05D007801 ORTHO05D009763 3.3e-08 61.6 84 52.4
Prupe.6G177500 Prunus persica HOM05D007801 ORTHO05D009763 3.3e-08 61.6 89 48.3
Gohir.A12G076100 Gossypium hirsutum HOM05D007801 ORTHO05D009763 5.6e-08 60.8 85 48.2
Gorai.003G046000 Gossypium raimondii HOM05D007801 ORTHO05D009763 7.3e-08 60.5 89 44.9
Rhsim10G0155400 Rhododendron simsii HOM05D007801 ORTHO05D009763 7.3e-08 60.5 76 51.3
FAN23G2938 Fragaria x ananassa HOM05D007801 ORTHO05D009763 9.6e-08 60.1 84 51.2
Oeu010979.1 Olea europaea HOM05D007801 ORTHO05D009763 1.2e-07 59.7 88 50.0
Nn1g05241 Nelumbo nucifera HOM05D007801 ORTHO05D009763 2.1e-07 58.9 84 45.2
FAN26G2641 Fragaria x ananassa HOM05D007801 ORTHO05D009763 2.8e-07 58.5 84 50.0
Manes.13G088201 Manihot esculenta HOM05D007801 ORTHO05D009763 2.8e-07 58.5 86 44.2
Nn5g28972 Nelumbo nucifera HOM05D007801 ORTHO05D009763 2.8e-07 58.5 84 45.2
Potri.007G086000 Populus trichocarpa HOM05D007801 ORTHO05D009763 2.8e-07 58.5 86 47.7
Gohir.A02G133600 Gossypium hirsutum HOM05D007801 ORTHO05D009763 3.6e-07 58.2 90 43.3
CiPaw.03G137300 Carya illinoinensis HOM05D007801 ORTHO05D009763 4.7e-07 57.8 87 46.0
TWI74G0355 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 4.7e-07 57.8 93 38.7
BcaB08g37146 Brassica carinata HOM05D008955 ORTHO05D011140 6.2e-07 57.4 85 43.5
Haze_25007 Corylus avellana HOM05D007801 ORTHO05D009763 8.1e-07 57.0 86 46.5
CSS0019659 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 2.4e-06 55.5 110 39.1
CSS0041778 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 2.4e-06 55.5 110 39.1
Potri.005G081400 Populus trichocarpa HOM05D007801 ORTHO05D009763 3.1e-06 55.1 85 45.9
Rhsim10G0155600 Rhododendron simsii HOM05D007801 ORTHO05D009763 3.1e-06 55.1 70 51.4
TAR376G1197 Trochodendron aralioides HOM05D007801 ORTHO05D009763 3.1e-06 55.1 84 45.2
Cfa002725 Carpinus fangiana HOM05D007801 ORTHO05D009763 6.9e-06 53.9 86 40.7
Ciclev10026857m.g Citrus clementina HOM05D007801 ORTHO05D009763 6.9e-06 53.9 89 38.2
Sabra05G0066600 Salix brachista HOM05D007801 ORTHO05D009763 9.0e-06 53.5 87 46.0


User provided reference genes

Program Settings