Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 4.2e-176 621.3 325 100.0
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 2.3e-150 535.8 340 84.1
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 1.5e-128 463.4 344 76.5
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 4.5e-122 441.8 310 80.0
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.5e-112 410.2 325 72.0
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 3.6e-103 379.0 299 72.6
Sopen12g009350 Solanum pennellii HOM05D004926 ORTHO05D013907 2.5e-80 303.1 209 79.4
Solyc01g015035.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 1.4e-75 287.3 214 78.5
PGSC0003DMG400017016 Solanum tuberosum HOM05D004926 ORTHO05D013907 1.7e-73 280.4 220 73.2
Solyc12g015923.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 7.1e-59 231.9 194 69.6
Solyc05g150114.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 5.6e-48 195.7 273 48.4
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 8.1e-47 191.8 139 77.0
PGSC0003DMG400021467 Solanum tuberosum HOM05D004926 ORTHO05D013907 3.4e-45 186.4 157 65.6
PGSC0003DMG400040719 Solanum tuberosum HOM05D004926 ORTHO05D013907 2.7e-42 176.8 145 70.3
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.5e-42 176.4 348 36.5
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 6.3e-39 165.6 124 72.6
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-38 163.3 220 44.5
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-37 159.1 244 40.2
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-33 148.3 206 43.2
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-33 147.9 223 40.8
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 1.8e-33 147.5 85 87.1
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 2.3e-33 147.1 128 63.3
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.4e-32 142.1 347 32.6
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.4e-32 142.1 257 36.6
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 7.4e-32 142.1 106 72.6
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-29 132.5 208 39.4
Sopen12g016880 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-29 132.5 88 77.3
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-28 131.7 212 39.2
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-28 130.2 285 34.4
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-28 130.2 191 41.4
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-27 128.3 191 41.4
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-27 127.9 214 38.8
Solyc05g045675.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 1.6e-26 124.4 252 39.7
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-26 124.0 203 41.4
Sopen06g005030 Solanum pennellii HOM05D008695 ORTHO05D001422 3.6e-26 123.2 331 31.7
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 6.1e-26 122.5 331 31.4
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 6.1e-26 122.5 330 30.9
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 6.1e-26 122.5 331 31.4
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-25 119.8 249 34.5
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 3.9e-25 119.8 335 30.1
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 5.1e-25 119.4 77 75.3
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-24 117.5 185 38.9
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 5.7e-24 115.9 70 82.9
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 7.4e-24 115.5 331 30.8
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 7.4e-24 115.5 322 29.8
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-23 114.4 328 31.7
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-22 111.7 130 46.9
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-22 110.9 130 46.9
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-22 109.4 159 44.0
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-21 107.1 126 46.0
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.7e-21 105.5 126 45.2
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.9e-20 103.6 125 46.4
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-20 103.2 119 47.1
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.0e-20 102.8 125 47.2
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 8.5e-20 102.1 53 90.6
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-19 101.7 120 47.5
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-19 100.5 124 43.5
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.4e-19 98.6 123 46.3
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.4e-19 98.6 120 45.8
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-18 97.1 175 37.7
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-18 96.7 316 29.1
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 6.1e-18 95.9 50 92.0
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-18 95.5 167 37.1
Sopen01g029340 Solanum pennellii HOM05D000047 ORTHO05D000589 1.0e-17 95.1 50 90.0
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-17 94.7 126 44.4
Nitab4.5_0009292g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-17 94.4 249 31.3
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.9e-17 93.2 312 28.5
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.2e-17 92.8 160 38.8
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-16 91.3 319 28.5
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-16 90.1 119 41.2
Sopen11g022440 Solanum pennellii HOM05D000047 ORTHO05D000589 4.4e-16 89.7 61 77.0
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-15 87.8 282 30.9
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-15 87.4 304 28.3
Nitab4.5_0000308g0170 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-15 87.0 70 57.1
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-15 87.0 148 41.9
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 4.8e-15 86.3 268 32.1
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-15 85.9 269 32.7
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.2e-15 85.5 179 36.3
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.4e-14 84.0 65 60.0
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-14 83.2 148 36.5
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-14 83.2 149 37.6
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-14 82.8 178 34.3
Sopen04g011010 Solanum pennellii HOM05D000047 ORTHO05D023162 5.3e-14 82.8 49 83.7
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 7.0e-14 82.4 82 50.0
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 9.1e-14 82.0 299 28.1
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-13 81.3 123 41.5
Nitab4.5_0000926g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-13 80.9 65 56.9
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-13 80.5 336 23.8
Sopen01g011600 Solanum pennellii HOM05D008695 ORTHO05D001422 3.5e-13 80.1 320 24.1
Sopen01g027720 Solanum pennellii HOM05D008695 ORTHO05D001422 3.5e-13 80.1 306 27.1
Nitab4.5_0004122g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-13 79.3 140 35.0
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.7e-13 79.0 153 35.3
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.7e-13 79.0 121 39.7
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-12 78.6 178 35.4
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-12 78.6 285 28.1
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-12 78.2 156 34.0
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-12 77.8 193 34.2
Solyc11g150138.1 Solanum lycopersicum HOM05D000047 ORTHO05D013907 1.7e-12 77.8 49 85.7
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 5.0e-12 76.3 208 31.7
Nitab4.5_0009292g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-11 74.7 99 44.4
Sopen04g011030 Solanum pennellii HOM05D000629 ORTHO05D023162 1.9e-11 74.3 37 89.2
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 3.2e-11 73.6 162 30.9
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-10 70.1 173 32.4
Solyc04g025125.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 4.7e-10 69.7 111 46.8
Nitab4.5_0009292g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.1e-10 69.3 74 47.3
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-09 68.2 279 26.5
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-09 67.8 263 26.6
CAN.G1452.1 Capsicum annuum HOM05D008695 ORTHO05D006375 2.3e-09 67.4 137 34.3
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-09 67.4 152 34.9
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-09 66.6 129 36.4
Nitab4.5_0006206g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-09 66.6 137 35.8
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-09 65.9 150 33.3
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-09 65.9 135 35.6
Nitab4.5_0001574g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-08 63.5 79 43.0
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-08 63.5 178 32.6
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-08 63.2 187 29.9
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.7e-08 62.8 144 33.3
Nitab4.5_0000030g0240 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.5e-08 62.4 113 37.2
Sopen01g018140 Solanum pennellii HOM05D008695 ORTHO05D001422 9.7e-08 62.0 282 24.8
Nitab4.5_0000058g0340 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-07 61.6 93 39.8
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-07 61.6 97 37.1
Nitab4.5_0004762g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-07 61.6 269 25.3
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.3e-07 61.6 79 38.0
Nitab4.5_0004478g0070 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.8e-07 60.5 77 41.6
Nitab4.5_0008949g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.8e-07 60.5 326 25.5
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 3.7e-07 60.1 43 67.4
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-07 59.7 137 33.6
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-06 58.2 79 36.7
Nitab4.5_0006504g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 1.8e-06 57.8 88 36.4
Nitab4.5_0000271g0150 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-06 57.4 77 41.6
Nitab4.5_0001239g0190 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.4e-06 57.4 164 28.0
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.4e-06 57.4 80 40.0
Sopen12g017290 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-06 57.4 175 29.1
Nitab4.5_0000248g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-06 57.0 96 39.6
Nitab4.5_0022423g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-06 57.0 73 42.5
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-06 56.2 94 38.3
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-06 56.2 140 31.4
Sopen12g017920 Solanum pennellii HOM05D008695 ORTHO05D001422 5.3e-06 56.2 104 29.8
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.0e-06 55.8 322 23.3


User provided reference genes

Program Settings