Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.0e-105 386.7 196 100.0
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 7.5e-104 380.6 196 98.0
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.1e-94 350.1 193 93.3
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.4e-89 333.2 197 87.3
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 2.4e-86 322.4 194 87.6
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 1.4e-81 306.6 193 83.9
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 6.0e-61 238.0 199 64.8
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 2.3e-60 236.1 194 67.0
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 3.0e-60 235.7 196 66.3
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 5.1e-60 235.0 200 66.5
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 8.6e-60 234.2 206 64.6
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 8.6e-60 234.2 194 63.4
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 2.5e-59 232.6 202 61.4
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 7.3e-59 231.1 211 62.1
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 9.5e-59 230.7 199 64.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.2e-58 230.3 196 62.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.1e-58 229.6 196 63.3
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 2.1e-58 229.6 198 64.1
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 2.1e-58 229.6 198 64.1
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 3.6e-58 228.8 205 63.4
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 3.6e-58 228.8 200 64.5
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.4e-57 226.9 202 61.9
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.4e-57 226.9 198 64.6
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.8e-57 226.5 200 61.5
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.8e-57 226.5 194 63.4
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 2.4e-57 226.1 197 64.5
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 3.1e-57 225.7 195 63.1
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 4.0e-57 225.3 198 63.1
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.2e-56 223.8 199 64.8
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 1.5e-56 223.4 192 66.1
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.5e-56 223.4 198 63.6
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 7.6e-56 221.1 196 62.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.3e-55 220.3 198 62.1
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.9e-55 219.2 182 65.4
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 3.8e-55 218.8 182 65.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 8.4e-55 217.6 197 61.4
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 8.4e-55 217.6 202 59.9
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.1e-54 217.2 182 64.3
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.1e-54 217.2 201 61.7
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.4e-54 216.9 203 60.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 3.2e-54 215.7 209 60.3
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 4.2e-54 215.3 195 63.1
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 5.4e-54 214.9 202 60.4
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.4e-54 214.9 195 62.6
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 7.1e-54 214.5 199 63.3
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 3.5e-53 212.2 194 61.9
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 4.6e-53 211.8 180 60.6
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 6.0e-53 211.5 195 62.1
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 6.0e-53 211.5 193 62.2
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 6.0e-53 211.5 190 63.2
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.0e-52 210.7 205 60.0
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 1.0e-52 210.7 182 62.1
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.0e-52 210.7 195 60.5
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.0e-52 210.7 190 63.7
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.7e-52 209.9 197 62.9
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 3.0e-52 209.1 190 61.1
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 5.1e-52 208.4 199 60.3
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 6.6e-52 208.0 201 57.7
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.1e-51 207.2 199 60.3
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.9e-51 206.5 189 60.8
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.9e-51 206.5 202 58.4
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 3.3e-51 205.7 200 59.5
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 8.1e-50 201.1 187 57.8
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.1e-49 200.7 195 56.9
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.4e-49 199.5 153 68.6
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.4e-49 199.5 194 56.2
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 4.0e-49 198.7 203 54.2
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 5.3e-49 198.4 198 55.1
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 6.9e-49 198.0 188 59.0
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.5e-48 196.8 183 57.4
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 3.4e-48 195.7 199 54.3
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 3.4e-48 195.7 201 53.2
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 3.4e-48 195.7 201 53.2
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 3.4e-48 195.7 201 53.2
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 4.4e-48 195.3 182 61.5
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.8e-48 194.9 174 62.6
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 1.3e-47 193.7 200 52.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.7e-47 193.4 184 57.6
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.2e-47 193.0 161 62.7
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.8e-47 192.2 188 55.3
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 4.9e-47 191.8 209 55.5
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 6.4e-47 191.4 176 57.4
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.1e-46 190.7 182 55.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.9e-46 189.9 190 55.3
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.4e-46 189.5 143 68.5
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.2e-46 189.1 188 54.8
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 1.2e-45 187.2 183 55.7
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.1e-45 186.4 199 53.8
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 4.6e-45 185.3 195 53.3
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 6.0e-45 184.9 152 67.1
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.0e-44 184.1 203 54.2
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.3e-44 183.0 201 52.7
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 6.6e-44 181.4 170 59.4
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.1e-43 180.6 202 54.5
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.5e-43 180.3 147 63.9
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 3.3e-43 179.1 190 54.7
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.1e-41 174.1 196 50.5
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 5.3e-41 171.8 203 47.8
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 2.6e-40 169.5 198 45.5
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.3e-39 167.2 154 53.9
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 2.8e-34 149.4 160 48.8
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 6.2e-34 148.3 160 47.5
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.6e-26 123.6 154 45.5
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.0e-25 117.9 90 62.2
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 4.9e-23 112.1 115 49.6
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 2.6e-16 89.7 159 34.6
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 3.4e-16 89.4 111 53.2
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.2e-15 86.7 116 50.0
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 5.0e-15 85.5 174 31.6
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.5e-14 83.2 142 28.9
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.1e-13 80.1 143 28.0
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.8e-12 77.0 107 43.9
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 5.1e-12 75.5 141 33.3
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 8.8e-12 74.7 79 50.6
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 8.8e-12 74.7 141 31.9
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 7.4e-11 71.6 141 32.6


User provided reference genes

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