Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g022360 Solanum pennellii HOM05D001309 ORTHO05D000385 1.5e-33 145.6 73 100.0
Solyc04g150152.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 5.9e-22 107.1 54 96.3
Solyc04g150151.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 3.3e-20 101.3 53 92.5
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 2.1e-19 98.6 53 92.5
Nitab4.5_0006065g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-17 92.4 69 69.6
Sopen04g022380 Solanum pennellii HOM05D007487 ORTHO05D008561 1.3e-16 89.4 47 91.5
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.3e-16 87.0 66 69.7
Nitab4.5_0000522g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-15 85.9 70 62.9
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 9.2e-15 83.2 53 73.6
Nitab4.5_0001523g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-14 80.9 72 55.6
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-14 80.5 71 57.7
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-13 79.3 66 63.6
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-13 77.8 53 71.7
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-13 77.4 53 71.7
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 6.6e-13 77.0 53 69.8
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-12 75.5 72 55.6
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-12 75.5 54 70.4
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-12 75.1 50 74.0
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 2.5e-12 75.1 52 73.1
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-12 73.9 53 66.0
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-12 73.6 72 52.8
Nitab4.5_0003622g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-12 73.6 72 52.8
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-12 73.6 53 66.0
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.5e-12 73.2 72 52.8
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-11 72.8 71 49.3
Nitab4.5_0000931g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-11 72.8 53 66.0
Nitab4.5_0002232g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-11 72.4 71 57.7
Nitab4.5_0007969g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-11 72.4 72 55.6
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-11 72.0 53 66.0
Nitab4.5_0000644g0170 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-11 72.0 72 52.8
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-11 71.6 72 51.4
Nitab4.5_0000049g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-11 71.2 58 58.6
Nitab4.5_0000415g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-11 71.2 71 50.7
Nitab4.5_0000740g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-11 71.2 54 64.8
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-11 70.9 54 64.8
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 8.0e-11 70.1 53 64.2
Nitab4.5_0000220g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.0e-11 70.1 53 64.2
PGSC0003DMG400039811 Solanum tuberosum HOM05D001309 ORTHO05D000385 8.0e-11 70.1 48 68.8
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-10 69.7 53 66.0
Nitab4.5_0001369g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-10 69.3 53 64.2
Nitab4.5_0002925g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-10 69.3 54 59.3
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-10 68.2 51 66.7
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-10 68.2 53 64.2
Nitab4.5_0000774g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-10 67.8 58 56.9
Nitab4.5_0000007g0330 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-10 67.4 53 58.5
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.8e-10 67.0 53 60.4
Nitab4.5_0007229g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.9e-10 66.6 53 62.3
Nitab4.5_0003082g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-09 65.5 57 57.9
Nitab4.5_0002530g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-09 64.7 58 56.9
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-09 64.3 71 47.9
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.5e-09 63.5 53 58.5
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.5e-09 63.5 53 60.4
Nitab4.5_0000151g0380 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-08 62.0 54 63.0
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-08 61.6 49 53.1
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-08 61.6 52 57.7
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-08 61.6 58 55.2
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-08 61.6 53 60.4
Nitab4.5_0001490g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-08 60.8 72 43.1
Sopen04g005960 Solanum pennellii HOM05D001309 ORTHO05D000385 4.9e-08 60.8 35 82.9
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-08 60.5 53 60.4
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-07 59.7 71 45.1
Nitab4.5_0001388g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-07 59.7 53 54.7
PGSC0003DMG400042577 Solanum tuberosum HOM05D001309 ORTHO05D000385 1.1e-07 59.7 51 58.8
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-07 58.9 53 60.4
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-07 58.9 53 56.6
Nitab4.5_0001903g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-07 58.2 36 75.0
Nitab4.5_0008316g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-07 57.8 71 45.1
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-06 55.8 53 58.5
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 3.5e-06 54.7 52 51.9
Nitab4.5_0002263g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-06 54.3 53 54.7


User provided reference genes

Program Settings