Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 9.5e-66 253.4 135 100.0
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.8e-65 251.9 134 99.3
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.9e-53 212.6 120 95.8
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.9e-51 204.9 135 80.7
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 1.1e-50 203.4 135 82.2
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 2.3e-48 195.7 135 79.3
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.7e-46 189.5 134 73.9
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 2.4e-45 185.7 135 72.6
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 1.6e-44 183.0 132 72.7
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 6.0e-44 181.0 135 71.1
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.0e-43 180.3 135 69.6
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.3e-43 179.9 135 70.4
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 3.0e-43 178.7 135 71.9
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 3.0e-43 178.7 134 70.9
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 5.1e-43 177.9 134 70.1
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 8.6e-43 177.2 135 70.4
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 8.6e-43 177.2 135 68.1
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 8.6e-43 177.2 135 68.1
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 1.1e-42 176.8 135 68.1
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 1.5e-42 176.4 132 71.2
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.9e-42 176.0 135 68.1
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.9e-42 176.0 135 68.9
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 3.3e-42 175.3 135 68.1
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 3.3e-42 175.3 135 68.1
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 3.3e-42 175.3 135 68.1
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 7.3e-42 174.1 135 68.1
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.2e-41 173.3 134 67.9
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 1.6e-41 172.9 135 68.9
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.8e-41 172.2 134 66.4
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 2.8e-41 172.2 135 68.9
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 8.1e-41 170.6 131 68.7
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.4e-40 169.9 135 65.9
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 1.4e-40 169.9 134 68.7
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.8e-40 169.5 135 65.9
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 5.2e-40 167.9 135 67.4
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 6.8e-40 167.5 135 67.4
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.5e-39 166.4 134 66.4
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.6e-39 165.6 130 66.9
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 3.4e-39 165.2 135 65.2
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 3.4e-39 165.2 135 64.4
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 4.4e-39 164.9 132 68.9
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 4.4e-39 164.9 130 65.4
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 5.8e-39 164.5 134 62.7
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 7.6e-39 164.1 135 65.9
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 7.6e-39 164.1 131 66.4
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 7.6e-39 164.1 135 63.7
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 9.9e-39 163.7 135 65.9
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 9.9e-39 163.7 125 69.6
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 9.9e-39 163.7 135 65.2
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 9.9e-39 163.7 132 64.4
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.3e-38 163.3 132 68.2
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.3e-38 163.3 131 67.2
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.7e-38 162.9 131 62.6
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.7e-38 162.9 165 57.0
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 2.2e-38 162.5 134 64.9
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 2.2e-38 162.5 135 64.4
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 2.2e-38 162.5 149 59.7
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 3.8e-38 161.8 132 62.1
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.8e-38 161.8 135 65.2
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 6.4e-38 161.0 135 63.0
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 8.4e-38 160.6 132 64.4
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 8.4e-38 160.6 132 64.4
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 8.4e-38 160.6 135 62.2
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.1e-37 160.2 132 63.6
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 1.4e-37 159.8 134 66.4
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.4e-37 159.8 135 63.7
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 1.9e-37 159.5 132 64.4
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 7.1e-37 157.5 134 63.4
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 9.2e-37 157.1 134 62.7
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 9.2e-37 157.1 132 64.4
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.2e-36 156.8 135 62.2
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.6e-36 156.4 135 62.2
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.1e-36 156.0 132 62.9
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.7e-36 155.6 135 62.2
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 4.6e-36 154.8 135 62.2
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 7.8e-36 154.1 133 63.2
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.0e-35 153.7 135 60.0
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 1.3e-35 153.3 135 61.5
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.9e-34 149.4 135 61.5
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 3.3e-34 148.7 126 62.7
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 5.6e-34 147.9 135 60.0
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 7.3e-34 147.5 132 60.6
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 9.6e-34 147.1 132 60.6
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.2e-33 146.7 134 56.7
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.1e-33 146.0 123 64.2
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 3.6e-33 145.2 120 66.7
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.7e-33 144.8 120 64.2
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.2e-33 144.4 120 65.0
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.2e-33 144.4 120 65.0
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 2.4e-32 142.5 122 62.3
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 4.0e-32 141.7 134 54.5
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 5.2e-32 141.4 147 57.8
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 6.9e-32 141.0 125 61.6
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 8.9e-32 140.6 108 67.6
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 7.6e-31 137.5 114 64.9
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.3e-30 136.7 106 67.0
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.4e-29 133.3 100 67.0
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 4.2e-29 131.7 101 69.3
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 7.8e-28 127.5 155 50.3
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 2.3e-27 125.9 120 55.8
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 2.4e-24 115.9 134 48.5
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 2.4e-24 115.9 134 51.5
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 6.9e-24 114.4 109 52.3
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 4.0e-16 88.6 67 68.7
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 2.0e-15 86.3 87 50.6
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 7.6e-15 84.3 128 40.6
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 5.5e-13 78.2 67 64.2
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 4.0e-08 62.0 42 69.0
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.0e-08 62.0 42 69.0
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.4e-07 58.9 135 34.1


User provided reference genes

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