Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g018350 Solanum pennellii HOM05D004244 ORTHO05D004964 4.4e-40 167.5 86 100.0
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 6.5e-28 127.1 81 81.5
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 8.8e-25 116.7 74 82.4
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 3.3e-24 114.8 83 72.3
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.4e-24 114.4 81 72.8
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 8.3e-23 110.2 81 71.6
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 1.6e-21 105.9 68 80.9
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 3.8e-20 101.3 83 67.5
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 1.0e-12 76.6 77 54.5
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 5.0e-12 74.3 73 50.7
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 3.6e-10 68.2 85 45.9
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 4.7e-10 67.8 77 45.5
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 6.1e-10 67.4 80 48.8
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 6.1e-10 67.4 80 48.8
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.0e-09 66.6 78 50.0
SalBow1G6706 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.0e-09 66.6 65 49.2
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 1.4e-09 66.2 81 43.2
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.4e-09 66.2 72 47.2
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.4e-09 66.2 65 49.2
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 1.8e-09 65.9 77 48.1
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 2.3e-09 65.5 51 60.8
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 3.0e-09 65.1 69 43.5
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 3.0e-09 65.1 51 60.8
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 3.0e-09 65.1 74 44.6
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 4.0e-09 64.7 74 44.6
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 5.2e-09 64.3 49 63.3
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 6.8e-09 63.9 70 44.3
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 8.9e-09 63.5 62 51.6
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 1.2e-08 63.2 76 43.4
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 5.7e-08 60.8 66 47.0
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 7.5e-08 60.5 74 44.6
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 7.5e-08 60.5 72 48.6
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 9.8e-08 60.1 79 38.0
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 1.7e-07 59.3 43 60.5
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 2.8e-07 58.5 46 56.5
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 3.7e-07 58.2 61 49.2
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 4.9e-07 57.8 75 44.0
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 6.3e-07 57.4 84 39.3
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 8.3e-07 57.0 82 40.2
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 8.3e-07 57.0 70 45.7
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.8e-06 55.8 70 40.0
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 3.1e-06 55.1 60 50.0
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 4.1e-06 54.7 79 40.5
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 7.0e-06 53.9 63 41.3


User provided reference genes

Program Settings