Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g018020 Solanum pennellii HOM05D001966 ORTHO05D011119 5.7e-56 220.7 113 100.0
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 1.3e-15 86.7 58 82.8
Sopen05g024120 Solanum pennellii HOM05D000004 ORTHO05D000002 8.6e-12 73.9 53 67.9
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 5.6e-11 71.2 44 84.1
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 5.6e-11 71.2 44 84.1
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 5.6e-11 71.2 44 84.1
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 9.5e-11 70.5 44 81.8
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 1.2e-10 70.1 44 81.8
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.2e-10 70.1 44 84.1
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.6e-10 69.7 44 81.8
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 1.6e-10 69.7 44 81.8
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.1e-10 69.3 44 81.8
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.1e-10 69.3 44 81.8
Sopen10g017100 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-10 69.3 56 60.7
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 3.6e-10 68.6 44 81.8
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 3.6e-10 68.6 44 81.8
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 3.6e-10 68.6 44 81.8
Sopen04g010390 Solanum pennellii HOM05D000004 ORTHO05D000034 3.6e-10 68.6 57 59.6
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 4.7e-10 68.2 44 81.8
Sopen02g003290 Solanum pennellii HOM05D000004 ORTHO05D000034 4.7e-10 68.2 57 57.9
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 1.1e-09 67.0 44 81.8
Phvul.001G037800 Phaseolus vulgaris HOM05D001966 ORTHO05D011119 1.1e-09 67.0 44 79.5
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.4e-09 66.6 44 79.5
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 1.8e-09 66.2 44 79.5
Sopen12g024960 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-09 66.2 57 54.4
Potri.011G074067 Populus trichocarpa HOM05D001966 ORTHO05D011119 2.3e-09 65.9 44 79.5
Sopen03g017290 Solanum pennellii HOM05D000004 ORTHO05D000034 2.3e-09 65.9 56 57.1
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.1e-09 65.5 44 77.3
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 3.1e-09 65.5 44 79.5
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 5.2e-09 64.7 44 72.7
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 1.2e-08 63.5 45 75.6
Sopen09g017770 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-08 63.2 56 58.9
Sopen12g013860 Solanum pennellii HOM05D000004 ORTHO05D000034 2.0e-08 62.8 56 58.9
Sopen08g006630 Solanum pennellii HOM05D000014 ORTHO05D000016 3.4e-08 62.0 57 52.6
Sopen03g025290 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 61.6 62 54.8
Sopen02g004050 Solanum pennellii HOM05D000004 ORTHO05D393518 5.8e-08 61.2 56 53.6
Sopen08g011860 Solanum pennellii HOM05D000014 ORTHO05D000093 5.8e-08 61.2 56 57.1
Sopen09g018000 Solanum pennellii HOM05D000004 ORTHO05D000034 5.8e-08 61.2 56 55.4
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 7.5e-08 60.8 44 70.5
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 7.5e-08 60.8 43 76.7
Sopen10g008700 Solanum pennellii HOM05D000004 ORTHO05D000034 9.9e-08 60.5 57 52.6
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.3e-07 60.1 44 68.2
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 1.7e-07 59.7 44 72.7
Sopen02g002810 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 59.7 61 49.2
Sc05g0009610 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.9e-07 58.9 35 85.7
Sopen08g011580 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.9 56 57.1
Sopen07g010280 Solanum pennellii HOM05D000004 ORTHO05D000034 4.9e-07 58.2 56 48.2
Sopen09g018780 Solanum pennellii HOM05D000004 ORTHO05D000034 4.9e-07 58.2 56 51.8
Sc23g0003920 Simmondsia chinensis HOM05D000806 ORTHO05D002320 6.4e-07 57.8 47 70.2
Sopen03g013960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-07 57.8 48 56.2
Sopen09g011520 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-07 57.4 62 51.6
Sopen09g013920 Solanum pennellii HOM05D000004 ORTHO05D000034 8.3e-07 57.4 62 54.8
Sopen09g018210 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-07 57.4 56 50.0
Sopen08g010600 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.0 56 50.0
Glyma.11G218300 Glycine max HOM05D001966 ORTHO05D011119 1.4e-06 56.6 54 63.0
Sopen09g012060 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-06 56.6 56 51.8
Sopen10g013560 Solanum pennellii HOM05D000014 ORTHO05D000034 1.4e-06 56.6 53 54.7
Sopen09g014210 Solanum pennellii HOM05D000004 ORTHO05D000034 1.9e-06 56.2 54 48.1
Sopen02g001090 Solanum pennellii HOM05D000004 ORTHO05D000034 2.4e-06 55.8 72 48.6
Sopen05g023780 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-06 55.8 62 50.0
Sopen12g017460 Solanum pennellii HOM05D000004 ORTHO05D000034 3.2e-06 55.5 53 60.4
Sopen03g015810 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-06 55.1 62 51.6
Sopen09g019520 Solanum pennellii HOM05D000004 ORTHO05D000034 4.1e-06 55.1 46 54.3
Sopen09g021890 Solanum pennellii HOM05D000004 ORTHO05D000034 4.1e-06 55.1 56 55.4
Sopen12g014590 Solanum pennellii HOM05D000004 ORTHO05D000034 5.4e-06 54.7 80 45.0
Sopen10g016320 Solanum pennellii HOM05D000004 ORTHO05D000034 7.1e-06 54.3 57 49.1
Sopen03g017580 Solanum pennellii HOM05D000004 ORTHO05D000034 9.2e-06 53.9 62 48.4
Sopen10g009460 Solanum pennellii HOM05D000004 ORTHO05D000034 9.2e-06 53.9 52 53.8
Sopen11g019080 Solanum pennellii HOM05D000014 ORTHO05D000016 9.2e-06 53.9 62 50.0
Sopen12g017360 Solanum pennellii HOM05D000004 ORTHO05D000034 9.2e-06 53.9 53 58.5
Sopen12g017420 Solanum pennellii HOM05D000004 ORTHO05D000034 9.2e-06 53.9 53 58.5


User provided reference genes

Program Settings