Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 5.9e-161 570.9 299 100.0
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 4.7e-142 508.1 306 86.6
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 9.0e-125 450.7 302 78.5
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 7.9e-113 411.0 300 75.7
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.3e-112 409.5 302 72.8
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 2.9e-107 392.5 281 73.3
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 8.4e-107 391.0 289 70.2
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 3.7e-102 375.6 279 69.2
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 6.2e-102 374.8 281 68.3
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 6.2e-102 374.8 286 68.5
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 1.1e-101 374.0 281 67.3
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 2.4e-101 372.9 279 69.5
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 2.4e-101 372.9 279 69.5
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 5.3e-101 371.7 279 68.5
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 6.9e-101 371.3 281 67.6
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 6.9e-101 371.3 281 67.6
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 6.9e-101 371.3 271 70.1
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 2.0e-100 369.8 289 68.2
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.6e-100 369.4 280 67.5
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 3.4e-100 369.0 201 98.0
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 5.8e-100 368.2 279 70.6
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 7.6e-100 367.9 282 68.4
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 2.2e-99 366.3 270 69.3
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 2.2e-99 366.3 285 67.7
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 2.2e-99 366.3 286 66.4
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 2.2e-99 366.3 282 68.8
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 2.9e-99 365.9 282 67.7
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 1.1e-98 364.0 288 67.4
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 1.4e-98 363.6 285 68.8
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 1.4e-98 363.6 281 68.7
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 2.5e-98 362.8 286 65.7
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 2.5e-98 362.8 281 69.8
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.2e-98 362.5 291 68.0
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 4.2e-98 362.1 263 70.3
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 7.1e-98 361.3 279 68.8
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 1.6e-97 360.1 285 67.4
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.6e-97 360.1 284 66.2
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.1e-97 359.8 278 67.6
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 2.7e-97 359.4 280 68.6
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 4.6e-97 358.6 281 66.9
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 4.6e-97 358.6 283 66.8
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 7.9e-97 357.8 285 68.1
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.0e-96 357.5 284 68.0
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 1.0e-96 357.5 295 65.4
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.8e-96 356.7 285 67.7
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 1.8e-96 356.7 280 67.5
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.8e-96 356.7 276 65.6
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 2.3e-96 356.3 284 67.3
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.0e-96 355.9 279 66.7
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 3.9e-96 355.5 285 67.7
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.1e-96 355.1 279 65.6
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 5.1e-96 355.1 273 68.5
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 5.1e-96 355.1 284 65.8
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 1.1e-95 354.0 270 68.1
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 1.5e-95 353.6 289 66.4
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 1.5e-95 353.6 292 66.1
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 1.9e-95 353.2 276 66.7
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 5.7e-95 351.7 285 67.0
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 5.7e-95 351.7 284 65.8
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.3e-94 350.5 284 66.5
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 2.2e-94 349.7 328 58.8
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 2.2e-94 349.7 275 67.3
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 3.7e-94 349.0 278 65.8
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 6.3e-94 348.2 284 67.6
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 1.1e-93 347.4 260 68.5
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 1.4e-93 347.1 268 65.3
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 1.4e-93 347.1 282 66.3
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 2.4e-93 346.3 286 66.8
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 3.1e-93 345.9 286 66.1
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.2e-92 344.0 286 65.7
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.2e-92 344.0 306 62.4
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 5.9e-92 341.7 265 65.7
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 7.7e-92 341.3 306 61.8
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.3e-91 340.5 266 64.3
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 3.8e-91 339.0 275 62.9
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 1.4e-90 337.0 277 62.5
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 1.4e-90 337.0 300 61.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.9e-90 336.7 314 60.5
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 3.2e-90 335.9 256 68.4
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 2.7e-89 332.8 265 64.9
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 3.9e-88 328.9 291 64.3
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.5e-87 327.0 282 64.2
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 3.3e-87 325.9 284 62.7
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 9.7e-87 324.3 288 61.5
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 9.7e-87 324.3 284 61.3
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 1.7e-86 323.6 293 61.1
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 3.7e-86 322.4 288 61.5
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 4.8e-86 322.0 266 62.8
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 4.8e-86 322.0 282 63.1
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 8.2e-86 321.2 281 62.3
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.8e-85 320.1 316 57.9
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 2.4e-85 319.7 283 61.5
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 2.7e-81 306.2 300 57.7
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 1.3e-78 297.4 291 59.1
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.7e-78 295.8 230 66.5
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 3.2e-74 282.7 287 56.8
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 6.1e-73 278.5 231 63.6
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 1.8e-72 276.9 285 53.7
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 1.1e-71 274.2 280 53.6
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 3.3e-71 272.7 196 68.9
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 5.7e-63 245.4 181 67.4
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 2.2e-59 233.4 177 70.1
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.9e-59 233.0 278 50.0
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 5.9e-52 208.8 267 45.3
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 3.8e-51 206.1 205 55.1
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.8e-49 199.9 144 68.8
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.3e-46 191.0 269 40.1
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 9.2e-45 184.9 279 38.7
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.6e-44 184.1 279 37.3
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 2.0e-44 183.7 152 61.2
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.0e-44 183.7 277 43.3
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.3e-43 181.0 167 62.3
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 3.9e-43 179.5 220 50.5
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 3.6e-41 172.9 127 71.7
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.8e-39 165.6 146 65.1
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 9.8e-39 164.9 148 63.5
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 3.7e-38 162.9 142 63.4
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.0e-35 154.8 148 59.5
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 2.6e-31 140.2 104 69.2
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 5.8e-31 139.0 136 59.6
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 2.2e-30 137.1 104 68.3
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 2.4e-29 133.7 89 69.7
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.2e-23 114.8 81 74.1
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 7.5e-23 112.1 291 33.7
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 2.1e-17 94.0 111 55.9
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 4.7e-17 92.8 80 61.2
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.5e-15 87.8 88 61.4
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 2.6e-15 87.0 87 58.6
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 3.4e-15 86.7 140 40.7
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.4e-13 81.3 91 53.8
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.2e-12 78.2 234 28.2
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 2.8e-09 67.0 169 29.0
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 8.1e-09 65.5 64 53.1


User provided reference genes

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