Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g011370 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-185 650.6 339 100.0
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-39 167.5 147 61.2
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-38 164.9 147 59.9
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-38 163.7 175 56.0
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-37 159.1 147 58.5
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-35 153.3 163 55.2
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-34 149.8 147 55.8
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-31 141.0 135 57.0
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 1.6e-29 134.4 147 50.3
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.6e-29 133.3 147 49.0
Sopen03g005290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-25 120.9 99 58.6
Sopen06g015160 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-25 119.8 132 49.2
Sopen09g011210 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-24 116.3 135 47.4
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 4.5e-24 116.3 98 58.2
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-24 115.9 147 39.5
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 7.7e-24 115.5 147 46.9
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.7e-23 114.4 147 44.2
Migut.O00008 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.3e-22 110.2 105 47.6
Manes.08G105950 Manihot esculenta HOM05D000002 ORTHO05D000001 5.5e-22 109.4 146 44.5
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-20 105.1 100 60.0
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 1.3e-18 98.2 256 30.9
Sopen03g010420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-18 96.7 128 46.1
Sopen09g021900 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-17 93.2 124 44.4
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 2.0e-16 90.9 109 48.6
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.7e-16 90.5 143 37.1
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 4.5e-16 89.7 147 33.3
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-15 88.6 99 54.5
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-15 88.2 148 37.2
CAN.G1709.2 Capsicum annuum HOM05D000011 ORTHO05D000018 2.3e-15 87.4 99 40.4
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 2.3e-15 87.4 148 32.4
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 8.6e-15 85.5 143 35.7
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-15 85.5 100 51.0
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-14 85.1 147 38.1
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-14 85.1 120 39.2
Sopen02g012310 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-14 85.1 93 47.3
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-14 83.2 147 32.0
Manes.18G125450 Manihot esculenta HOM05D000002 ORTHO05D000001 9.5e-14 82.0 76 48.7
Sopen01g012660 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-14 82.0 103 48.5
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 1.6e-13 81.3 145 33.8
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-13 80.5 185 29.2
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 3.6e-13 80.1 84 57.1
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.6e-13 80.1 106 38.7
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.7e-13 79.7 135 34.8
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 4.7e-13 79.7 104 48.1
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-13 79.3 145 31.7
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.1e-13 79.3 146 31.5
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-13 79.0 151 32.5
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-12 78.6 172 34.9
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 1.0e-12 78.6 149 32.9
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 2.3e-12 77.4 169 31.4
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-12 75.9 145 31.0
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 6.8e-12 75.9 151 31.8
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 6.8e-12 75.9 100 42.0
Sopen01g027010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-11 75.1 93 48.4
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-11 74.7 150 30.7
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-11 74.7 150 30.7
ECA240G3677 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.0e-11 74.3 149 35.6
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.6e-11 73.9 143 30.1
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 4.4e-11 73.2 145 31.0
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-11 73.2 150 28.7
VMungo1080G0955 Vigna mungo HOM05D000002 ORTHO05D000001 1.3e-10 71.6 138 32.6
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.7e-10 71.2 145 32.4
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 2.2e-10 70.9 152 28.3
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 4.9e-10 69.7 137 32.1
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.4e-10 69.3 151 29.8
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 8.3e-10 68.9 145 29.0
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.1e-09 68.6 146 32.2
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-09 68.6 150 30.7
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-09 67.8 158 31.0
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.4e-09 66.2 196 26.5
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.4e-09 66.2 121 33.1
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 7.0e-09 65.9 154 29.9
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-09 65.5 156 26.3
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.2e-09 65.5 118 32.2
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.6e-08 64.7 170 30.0
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-08 64.3 146 27.4
Sopen04g005320 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-08 64.3 84 46.4
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-08 63.9 100 35.0
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-08 63.9 158 29.1
Sopen04g005340 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-08 63.9 72 51.4
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 3.5e-08 63.5 128 29.7
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.5e-08 63.5 164 27.4
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-08 63.5 84 45.2
Hma1.2p1_0179F.1_g079390 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-08 63.5 87 35.6
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 4.6e-08 63.2 156 26.9
Nitab4.5_0007134g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 4.6e-08 63.2 100 38.0
SHI29540 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-08 63.2 145 29.7
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 6.0e-08 62.8 139 28.8
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.0e-08 62.8 147 27.2
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.0e-08 62.8 147 27.2
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-08 62.4 128 29.7
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-08 62.4 185 27.0
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.8e-08 62.4 146 28.8
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 7.8e-08 62.4 146 29.5
Migut.D01270 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.0e-07 62.0 84 44.0
THA.LOC104798820 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-07 62.0 142 30.3
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-07 61.6 146 28.8
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-07 61.6 116 31.0
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 1.3e-07 61.6 127 29.1
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 60.8 153 32.0
CAN.G352.76 Capsicum annuum HOM05D000002 ORTHO05D000001 2.3e-07 60.8 68 45.6
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 60.8 96 33.3
Nitab4.5_0001654g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.0e-07 60.5 100 37.0
Atru.chr1.2399 Acer truncatum HOM05D000002 ORTHO05D000001 3.9e-07 60.1 144 28.5
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 3.9e-07 60.1 144 27.1
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 5.0e-07 59.7 154 27.9
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 5.0e-07 59.7 139 28.1
Sopen06g032620 Solanum pennellii HOM05D000537 ORTHO05D000415 6.6e-07 59.3 77 46.8
ECA233G3870 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 58.5 101 32.7
ECA238G1485 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 58.5 74 40.5
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 1.5e-06 58.2 168 26.8
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.5e-06 57.4 150 26.7
Atru.chr3.2493 Acer truncatum HOM05D000002 ORTHO05D000001 4.3e-06 56.6 85 32.9
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-06 56.6 185 25.4
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.3e-06 56.6 163 24.5
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 5.6e-06 56.2 153 26.1
Prupe.1G170400 Prunus persica HOM05D000002 ORTHO05D000001 5.6e-06 56.2 96 32.3
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.6e-06 56.2 151 25.2
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.6e-06 56.2 150 24.0
Cc06_g20010 Coffea canephora HOM05D000002 ORTHO05D000001 7.3e-06 55.8 89 34.8
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 9.5e-06 55.5 99 28.3
RcHm_v2.0_Chr4g0431731 Rosa chinensis HOM05D009166 ORTHO05D000001 9.5e-06 55.5 166 26.5
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 9.5e-06 55.5 139 28.1
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 9.5e-06 55.5 138 28.3
Sopen01g012520 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-06 55.5 141 27.0


User provided reference genes

Program Settings