Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g009090 Solanum pennellii HOM05D000680 ORTHO05D005619 9.4e-36 152.9 73 100.0
Peaxi162Scf00334g01212 Petunia axillaris HOM05D000680 ORTHO05D005619 2.2e-08 62.0 43 76.7
CAN.G1183.5 Capsicum annuum HOM05D000680 ORTHO05D005619 3.7e-08 61.2 43 76.7
CAN.G1185.6 Capsicum annuum HOM05D000680 ORTHO05D005619 3.7e-08 61.2 43 76.7
CAN.G579.7 Capsicum annuum HOM05D000680 ORTHO05D005619 3.7e-08 61.2 43 76.7
PGSC0003DMG400025106 Solanum tuberosum HOM05D000680 ORTHO05D005619 3.7e-08 61.2 43 76.7
Solyc01g017220.2 Solanum lycopersicum HOM05D000680 ORTHO05D005619 4.9e-08 60.8 43 74.4
CAN.G12.5 Capsicum annuum HOM05D000680 ORTHO05D005619 1.9e-07 58.9 29 96.6
CAN.G1001.35 Capsicum annuum HOM05D000680 ORTHO05D005619 3.2e-07 58.2 43 72.1
CAN.G170.12 Capsicum annuum HOM05D000680 ORTHO05D005619 4.1e-07 57.8 29 96.6
arahy.Tifrunner.gnm1.ann1.487MWI Arachis hypogaea HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
arahy.Tifrunner.gnm1.ann1.5XLW1T Arachis hypogaea HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
arahy.Tifrunner.gnm1.ann1.V9EYC9 Arachis hypogaea HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
BolSC29t60462H Brassica oleracea HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
BolSC35t60756H Brassica oleracea HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
BraA09t38713Z Brassica rapa HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
BraSC58t46416Z Brassica rapa HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
COL.COLO4_00374 Corchorus olitorius HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
COL.COLO4_03240 Corchorus olitorius HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
Gohir.A09G103000 Gossypium hirsutum HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
Gohir.D03G073656 Gossypium hirsutum HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
HanXRQChr00c0339g0573791 Helianthus annuus HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
HanXRQChr00c0345g0573921 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr00c0702g0576851 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr00c0759g0577211 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr01g0020391 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr02g0044931 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr05g0151431 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr07g0200991 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr08g0210321 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr10g0277991 Helianthus annuus HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
HanXRQChr10g0283511 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr10g0284201 Helianthus annuus HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
HanXRQChr10g0289231 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr11g0326791 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
HanXRQChr13g0413461 Helianthus annuus HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
HanXRQChr13g0413561 Helianthus annuus HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
HanXRQCPg0580001 Helianthus annuus HOM05D000680 ORTHO05D000738 5.4e-07 57.4 43 69.8
Lsat_1_v5_gn_7_68801 Lactuca sativa HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
Nn021s41543 Nelumbo nucifera HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
Nn1g03013 Nelumbo nucifera HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
PGR111G0027 Punica granatum HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
RcHm_v2.0_Chr3g0497001 Rosa chinensis HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
RcHm_v2.0_CPg0502131 Rosa chinensis HOM05D000680 ORTHO05D005619 5.4e-07 57.4 43 69.8
Lj4g0014307 Lotus japonicus HOM05D000680 ORTHO05D005619 7.0e-07 57.0 46 65.2
Lalb_Chr13g0292741 Lupinus albus HOM05D000680 ORTHO05D005619 7.0e-07 57.0 46 63.0
Gohir.A11G150850 Gossypium hirsutum HOM05D000680 ORTHO05D005619 9.2e-07 56.6 43 67.4
ATCG00470 Arabidopsis thaliana HOM05D000680 ORTHO05D005619 1.2e-06 56.2 29 89.7
MELO3C027174.2 Cucumis melo HOM05D000680 ORTHO05D000738 1.2e-06 56.2 43 67.4
Gohir.1Z049802 Gossypium hirsutum HOM05D000680 ORTHO05D005619 1.2e-06 56.2 29 89.7
HanXRQChr03g0073741 Helianthus annuus HOM05D000680 ORTHO05D005619 1.2e-06 56.2 29 89.7
PSO548G0022 Papaver somniferum HOM05D000680 ORTHO05D005619 1.2e-06 56.2 43 69.8
TPR.G3882 Trifolium pratense HOM05D007791 ORTHO05D000653 1.2e-06 56.2 29 89.7
CSS0042422 Camellia sinensis var. sinensis HOM05D000680 ORTHO05D005619 1.6e-06 55.8 43 67.4
Gohir.D01G102281 Gossypium hirsutum HOM05D000680 ORTHO05D005619 1.6e-06 55.8 43 67.4
Lalb_Chr25g0281551 Lupinus albus HOM05D000680 ORTHO05D000738 2.0e-06 55.5 43 67.4
Eucgr.J02731 Eucalyptus grandis HOM05D000680 ORTHO05D005619 2.7e-06 55.1 29 86.2
Nitab4.5_0000140g0150 Nicotiana tabacum HOM05D000680 ORTHO05D005619 2.7e-06 55.1 41 73.2
Solyc00g500140.1 Solanum lycopersicum HOM05D000680 ORTHO05D005619 3.5e-06 54.7 43 72.1
HanXRQChr04g0112031 Helianthus annuus HOM05D000680 ORTHO05D005619 4.6e-06 54.3 43 67.4
Medtr4g451265 Medicago truncatula HOM05D000680 ORTHO05D005619 4.6e-06 54.3 29 86.2
Medtr5g090760 Medicago truncatula HOM05D000680 ORTHO05D005619 4.6e-06 54.3 29 86.2
Gohir.A12G091244 Gossypium hirsutum HOM05D000680 ORTHO05D005619 6.0e-06 53.9 43 65.1


User provided reference genes

Program Settings