Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 1.3e-154 549.7 275 100.0
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 2.3e-151 538.9 275 96.0
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.5e-115 418.7 262 76.3
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.7e-109 398.7 262 73.7
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 4.0e-95 352.1 255 67.8
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 4.3e-73 278.9 262 56.9
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 3.6e-72 275.8 262 50.4
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 9.9e-70 267.7 264 51.9
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 1.3e-69 267.3 266 49.2
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.7e-69 266.9 153 81.7
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 2.5e-65 253.1 270 50.7
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 1.6e-64 250.4 273 45.8
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 1.8e-63 246.9 275 44.4
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 1.5e-62 243.8 275 44.7
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 1.3e-61 240.7 261 49.4
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.8e-61 239.2 268 46.3
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.2e-59 234.2 277 45.5
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 1.0e-58 231.1 276 44.2
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 1.3e-58 230.7 262 42.7
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 2.3e-58 229.9 271 45.0
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 3.0e-58 229.6 276 44.9
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 5.1e-58 228.8 258 45.0
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 5.1e-58 228.8 265 45.3
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 5.1e-58 228.8 276 44.9
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 7.3e-57 224.9 272 43.8
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 9.6e-57 224.6 273 45.1
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 3.6e-56 222.6 268 43.7
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 5.3e-55 218.8 269 41.3
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 2.0e-54 216.9 294 40.1
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 2.0e-54 216.9 270 44.1
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 4.5e-54 215.7 265 42.6
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 5.8e-54 215.3 278 44.2
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 9.9e-54 214.5 223 45.7
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 1.3e-53 214.2 266 44.4
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 1.9e-52 210.3 263 41.1
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 1.9e-52 210.3 266 39.5
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 4.2e-52 209.1 270 39.3
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 5.5e-52 208.8 263 42.6
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 9.3e-52 208.0 289 38.8
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 2.1e-51 206.8 260 41.2
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 2.7e-51 206.5 261 40.2
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 3.5e-51 206.1 269 41.6
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 4.6e-51 205.7 269 39.4
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 4.6e-51 205.7 274 39.1
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 1.8e-50 203.8 244 44.3
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 3.9e-50 202.6 270 42.6
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.1e-49 201.1 282 40.4
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 2.5e-49 199.9 264 39.0
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.5e-49 199.9 248 42.3
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 4.3e-49 199.1 266 39.5
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 7.4e-49 198.4 284 38.0
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 2.1e-48 196.8 272 40.8
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 2.8e-48 196.4 268 41.0
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.2e-48 195.3 269 40.1
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.1e-47 194.5 268 41.0
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 5.3e-47 192.2 266 39.1
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 1.2e-46 191.0 265 39.2
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.6e-46 188.3 259 40.9
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 3.8e-45 186.0 262 43.5
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 6.5e-45 185.3 283 37.8
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 8.4e-45 184.9 275 37.5
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.0e-42 176.4 248 40.3
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 3.9e-42 176.0 223 41.3
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 3.3e-41 172.9 284 36.3
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 2.8e-40 169.9 270 34.8
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 3.1e-39 166.4 274 35.0
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 5.3e-39 165.6 265 37.4
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 9.3e-36 154.8 202 40.6
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.0e-34 151.4 285 35.8
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 5.1e-34 149.1 230 36.1
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 4.3e-33 146.0 264 33.3
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 4.8e-32 142.5 199 39.7
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 6.3e-32 142.1 180 43.9
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 8.2e-32 141.7 274 34.7
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.1e-31 141.4 262 32.1
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 1.7e-29 134.0 218 34.9
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 3.8e-29 132.9 264 31.4
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 4.6e-27 125.9 191 35.1
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 7.9e-27 125.2 246 31.3
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 7.4e-25 118.6 266 30.1
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 1.7e-21 107.5 136 43.4
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 2.2e-21 107.1 198 33.3
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 2.9e-21 106.7 134 43.3
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 8.5e-21 105.1 273 28.9
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 8.5e-21 105.1 113 46.9
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.4e-20 104.4 169 36.7
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 4.2e-20 102.8 258 27.1
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 7.2e-20 102.1 146 37.0
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 7.9e-19 98.6 266 27.4
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 1.0e-18 98.2 266 27.8
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 5.1e-18 95.9 170 34.1
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.0e-17 94.0 271 26.2
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 2.6e-17 93.6 172 35.5
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 5.7e-17 92.4 272 29.0
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 4.8e-16 89.4 273 27.5
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 6.3e-16 89.0 301 24.3
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 2.4e-15 87.0 150 32.7
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.0e-14 84.0 271 27.7
AagrBONN_evm.TU.Sc2ySwM_368.1069 Anthoceros agrestis HOM05D027965 ORTHO05D007451 1.7e-13 80.9 295 25.4
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 3.8e-13 79.7 82 46.3
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 3.8e-13 79.7 101 39.6
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 1.1e-12 78.2 267 27.3
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 3.2e-12 76.6 267 26.6
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.2e-12 76.6 105 39.0
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 5.5e-12 75.9 267 26.6
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.2e-12 75.5 101 41.6
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 9.4e-12 75.1 269 26.0
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 9.4e-12 75.1 269 26.0
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 1.2e-11 74.7 266 25.2
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 1.2e-11 74.7 266 25.2
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.2e-11 74.7 86 39.5
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 2.1e-11 73.9 267 27.0
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 3.6e-11 73.2 267 25.1
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.7e-11 72.8 265 24.2
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 6.1e-11 72.4 264 26.1
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.0e-11 72.0 102 41.2
Cpa.g.sc5.218 Carica papaya HOM05D007529 ORTHO05D007451 1.8e-10 70.9 85 40.0
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 2.3e-10 70.5 94 40.4
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.3e-10 70.5 260 24.2
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 8.8e-10 68.6 263 26.6
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 8.8e-10 68.6 263 26.6
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.1e-09 68.2 261 24.5
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 5.7e-09 65.9 259 24.7
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 7.5e-09 65.5 267 23.2
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 9.7e-09 65.1 259 23.2
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 1.7e-08 64.3 106 34.9
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.8e-08 63.5 256 24.6
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.7e-08 63.2 262 23.7
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 4.8e-08 62.8 266 23.7
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.4e-07 61.2 142 27.5
Oeu029713.1 Olea europaea HOM05D007529 ORTHO05D007451 9.1e-07 58.5 65 49.2
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.7e-06 57.0 139 25.9


User provided reference genes

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