Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g008650 Solanum pennellii HOM05D000497 ORTHO05D051197 1.7e-47 192.2 89 100.0
Sopen08g030250 Solanum pennellii HOM05D000497 ORTHO05D000020 3.7e-42 174.5 88 90.9
Solyc08g081960.3 Solanum lycopersicum HOM05D000497 ORTHO05D000020 1.4e-41 172.6 88 90.9
Solyc05g024230.3 Solanum lycopersicum HOM05D000497 ORTHO05D051197 1.5e-40 169.1 82 95.1
PGSC0003DMG400012305 Solanum tuberosum HOM05D000497 ORTHO05D000020 4.5e-40 167.5 88 90.9
Nitab4.5_0000223g0100 Nicotiana tabacum HOM05D000497 ORTHO05D000020 9.1e-25 116.7 94 64.9
Nitab4.5_0004161g0090 Nicotiana tabacum HOM05D000497 ORTHO05D000020 9.1e-25 116.7 94 64.9
Peaxi162Scf00074g00125 Petunia axillaris HOM05D000497 ORTHO05D000020 7.7e-24 113.6 96 60.4
CAN.G532.90 Capsicum annuum HOM05D000497 ORTHO05D000020 1.2e-21 106.3 87 64.4
Lj8P211T8 Lonicera japonica HOM05D000497 ORTHO05D000020 7.0e-17 90.5 93 50.5
Dinv38866 Davidia involucrata HOM05D000497 ORTHO05D000020 2.0e-16 89.0 92 55.4
Hma1.2p1_0952F.1_g240855 Hydrangea macrophylla HOM05D000497 ORTHO05D000020 7.7e-16 87.0 89 53.9
Lj2P172T25 Lonicera japonica HOM05D000497 ORTHO05D000020 1.3e-15 86.3 82 58.5
Actinidia01401 Actinidia chinensis HOM05D000497 ORTHO05D000020 8.6e-15 83.6 94 46.8
Dinv37558 Davidia involucrata HOM05D000497 ORTHO05D000020 1.1e-14 83.2 84 54.8
Hma1.2p1_0359F.1_g135450 Hydrangea macrophylla HOM05D000497 ORTHO05D000020 2.8e-13 78.6 89 46.1
Rhsim02G0240600 Rhododendron simsii HOM05D000497 ORTHO05D000020 1.0e-12 76.6 95 46.3
SalBow1G2339 Salvia bowleyana HOM05D000497 ORTHO05D000020 5.2e-12 74.3 92 48.9
Prupe.5G114100 Prunus persica HOM05D000497 ORTHO05D000020 8.9e-12 73.6 97 42.3
Actinidia04217 Actinidia chinensis HOM05D000497 ORTHO05D000020 1.5e-11 72.8 95 43.2
Lsat_1_v5_gn_3_10000 Lactuca sativa HOM05D000497 ORTHO05D000020 2.6e-11 72.0 89 47.2
Atru.chr9.2058 Acer truncatum HOM05D000497 ORTHO05D000020 3.4e-11 71.6 94 44.7
Manes.01G046200 Manihot esculenta HOM05D000497 ORTHO05D000020 7.5e-11 70.5 96 42.7
CiPaw.12G085600 Carya illinoinensis HOM05D000497 ORTHO05D000020 1.7e-10 69.3 97 43.3
SalBow1G0973 Salvia bowleyana HOM05D000497 ORTHO05D000020 2.2e-10 68.9 81 49.4
Migut.E01228 Erythranthe guttata HOM05D000497 ORTHO05D000020 2.8e-10 68.6 81 51.9
Cfa012853 Carpinus fangiana HOM05D000497 ORTHO05D000020 3.7e-10 68.2 92 42.4
FAN08G1813 Fragaria x ananassa HOM05D000497 ORTHO05D000020 1.1e-09 66.6 99 42.4
MD06G1100500 Malus domestica HOM05D000497 ORTHO05D000020 1.1e-09 66.6 101 41.6
RcHm_v2.0_Chr7g0195581 Rosa chinensis HOM05D000497 ORTHO05D000020 1.1e-09 66.6 96 43.8
unitig_46.g18537 Utricularia gibba HOM05D000497 ORTHO05D000020 1.1e-09 66.6 93 44.1
Manes.02G013200 Manihot esculenta HOM05D000497 ORTHO05D000020 1.4e-09 66.2 94 41.5
Haze_08685 Corylus avellana HOM05D000497 ORTHO05D000020 1.8e-09 65.9 91 42.9
Migut.A00686 Erythranthe guttata HOM05D000497 ORTHO05D000020 2.4e-09 65.5 95 44.2
MD14G1120000 Malus domestica HOM05D000497 ORTHO05D000020 2.4e-09 65.5 105 40.0
QL02p031592 Quercus lobata HOM05D000497 ORTHO05D000020 2.4e-09 65.5 99 36.4
MSTRG.1824 Avicennia marina HOM05D000497 ORTHO05D000020 5.4e-09 64.3 92 47.8
FvH4_5g03920 Fragaria vesca HOM05D000497 ORTHO05D000020 5.4e-09 64.3 99 41.4
DCAR_008538 Daucus carota HOM05D000497 ORTHO05D000020 7.0e-09 63.9 90 43.3
FAN13G0894 Fragaria x ananassa HOM05D000497 ORTHO05D000020 7.0e-09 63.9 97 42.3
COL.COLO4_21270 Corchorus olitorius HOM05D000497 ORTHO05D000020 9.2e-09 63.5 96 38.5
ECA233G0051 Erigeron canadensis HOM05D000497 ORTHO05D000020 9.2e-09 63.5 96 43.8
MSTRG.11938 Avicennia marina HOM05D000497 ORTHO05D000020 1.2e-08 63.2 89 41.6
FAN13G3183 Fragaria x ananassa HOM05D000497 ORTHO05D000020 1.2e-08 63.2 99 41.4
HanXRQChr17g0535351 Helianthus annuus HOM05D000497 ORTHO05D000020 1.2e-08 63.2 89 43.8
vmacro11449 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 1.6e-08 62.8 115 37.4
Duzib084G0480 Durio zibethinus HOM05D000497 ORTHO05D000020 2.0e-08 62.4 87 43.7
CiPaw.11G124700 Carya illinoinensis HOM05D000497 ORTHO05D000020 3.5e-08 61.6 96 42.7
ECA246G1887 Erigeron canadensis HOM05D000497 ORTHO05D000020 4.5e-08 61.2 88 43.2
Peaxi162Scf00102g01717 Petunia axillaris HOM05D000497 ORTHO05D000020 4.5e-08 61.2 77 46.8
TAR375G1156 Trochodendron aralioides HOM05D000497 ORTHO05D000020 4.5e-08 61.2 89 41.6
Oeu039505.1 Olea europaea HOM05D000497 ORTHO05D000020 5.9e-08 60.8 96 41.7
SGA_v2.0_scaffold111G31443 Striga asiatica HOM05D000497 ORTHO05D000020 5.9e-08 60.8 89 41.6
Ciclev10021073m.g Citrus clementina HOM05D000497 ORTHO05D000020 7.8e-08 60.5 92 39.1
FAN04G0750 Fragaria x ananassa HOM05D000497 ORTHO05D000020 7.8e-08 60.5 94 41.5
PGR042G2011 Punica granatum HOM05D000497 ORTHO05D000020 7.8e-08 60.5 104 38.5
SGA_v2.0_scaffold173G39099 Striga asiatica HOM05D000497 ORTHO05D000020 7.8e-08 60.5 94 41.5
BcaNung03191 Brassica carinata HOM05D000497 ORTHO05D000020 1.0e-07 60.1 77 46.8
C07p53070 Brassica napus HOM05D000497 ORTHO05D000020 1.0e-07 60.1 77 46.8
BolC7t45805H Brassica oleracea HOM05D000497 ORTHO05D000020 1.0e-07 60.1 77 46.8
Oeu011810.1 Olea europaea HOM05D000497 ORTHO05D000020 1.0e-07 60.1 94 44.7
HanXRQChr07g0191121 Helianthus annuus HOM05D000497 ORTHO05D000020 1.3e-07 59.7 89 42.7
SGA_v2.0_scaffold96G28986 Striga asiatica HOM05D000497 ORTHO05D000020 1.3e-07 59.7 80 45.0
A03p54730 Brassica napus HOM05D000497 ORTHO05D000020 5.0e-07 57.8 79 48.1
BraA03t14541Z Brassica rapa HOM05D000497 ORTHO05D000020 5.0e-07 57.8 79 48.1
CANSAT21G1394 Cannabis sativa HOM05D000497 ORTHO05D000020 5.0e-07 57.8 96 38.5
Lsat_1_v5_gn_6_11860 Lactuca sativa HOM05D000497 ORTHO05D000020 5.0e-07 57.8 77 45.5
TWI60G0733 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 5.0e-07 57.8 90 37.8
TAR374G1231 Trochodendron aralioides HOM05D000497 ORTHO05D000020 5.0e-07 57.8 89 40.4
A01p15100 Brassica napus HOM05D000497 ORTHO05D000020 6.6e-07 57.4 85 44.7
BraA01t01448Z Brassica rapa HOM05D000497 ORTHO05D000020 6.6e-07 57.4 85 44.7
BcaNung05925 Brassica carinata HOM05D000497 ORTHO05D000020 1.1e-06 56.6 84 44.0
CARHR231150 Cardamine hirsuta HOM05D000497 ORTHO05D000020 1.5e-06 56.2 82 42.7
Oeu009944.1 Olea europaea HOM05D000497 ORTHO05D000020 1.5e-06 56.2 91 45.1
BcaNung01084 Brassica carinata HOM05D000497 ORTHO05D000020 1.9e-06 55.8 94 41.5
CSS0041141 Camellia sinensis var. sinensis HOM05D000497 ORTHO05D000020 2.5e-06 55.5 91 41.8
Gohir.D09G185500 Gossypium hirsutum HOM05D000497 ORTHO05D000020 3.3e-06 55.1 96 36.5
Gorai.006G208200 Gossypium raimondii HOM05D000497 ORTHO05D000020 3.3e-06 55.1 96 36.5
Nn7g37379 Nelumbo nucifera HOM05D000497 ORTHO05D000020 3.3e-06 55.1 92 34.8
PGR031G3394 Punica granatum HOM05D000497 ORTHO05D000020 3.3e-06 55.1 90 40.0
TWI81G0255 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 4.3e-06 54.7 74 40.5
AL7G29600 Arabidopsis lyrata HOM05D000497 ORTHO05D000020 5.6e-06 54.3 88 42.0
AT4G23750 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 5.6e-06 54.3 88 42.0
Thecc.03G292000 Theobroma cacao HOM05D000497 ORTHO05D000020 5.6e-06 54.3 96 35.4
DCAR_027724 Daucus carota HOM05D000497 ORTHO05D000020 9.5e-06 53.5 87 34.5


User provided reference genes

Program Settings