Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g005410 Solanum pennellii HOM05D025745 ORTHO05D028490 2.3e-192 676.0 527 100.0
CAN.G1557.4 Capsicum annuum HOM05D025745 ORTHO05D028490 8.5e-78 295.4 541 46.2
Nitab4.5_0008987g0060 Nicotiana tabacum HOM05D025745 ORTHO05D028490 1.2e-34 152.1 230 50.0
Nitab4.5_0000426g0190 Nicotiana tabacum HOM05D025745 ORTHO05D028490 1.1e-27 129.0 195 48.2
CAN.G1602.6 Capsicum annuum HOM05D002337 ORTHO05D002412 1.9e-13 81.6 281 32.7
Dinv31396 Davidia involucrata HOM05D002337 ORTHO05D002412 4.3e-13 80.5 246 35.8
Peaxi162Scf00015g00254 Petunia axillaris HOM05D002337 ORTHO05D002412 8.1e-12 76.3 173 40.5
Nitab4.5_0000914g0140 Nicotiana tabacum HOM05D002337 ORTHO05D002412 5.2e-11 73.6 165 41.2
CSS0036050 Camellia sinensis var. sinensis HOM05D002337 ORTHO05D002412 8.9e-11 72.8 238 33.2
Sopen05g033320 Solanum pennellii HOM05D002337 ORTHO05D002412 2.6e-10 71.2 160 38.1
Lj1P930T24 Lonicera japonica HOM05D002337 ORTHO05D002412 1.3e-09 68.9 270 32.2
Oeu058315.1 Olea europaea HOM05D002337 ORTHO05D002412 1.3e-09 68.9 261 34.1
CSS0031665 Camellia sinensis var. sinensis HOM05D002337 ORTHO05D002412 8.4e-09 66.2 248 31.5
PGSC0003DMG400023413 Solanum tuberosum HOM05D002337 ORTHO05D002412 1.1e-08 65.9 283 29.0
Manes.08G072701 Manihot esculenta HOM05D002337 ORTHO05D002412 2.4e-08 64.7 163 35.6
Manes.08G072800 Manihot esculenta HOM05D002337 ORTHO05D002412 2.4e-08 64.7 163 35.6
Solyc05g054850.1 Solanum lycopersicum HOM05D002337 ORTHO05D002412 2.4e-08 64.7 286 28.7
ECA276G0006 Erigeron canadensis HOM05D002337 ORTHO05D002412 3.2e-08 64.3 208 31.2
TWI53G1567 Tripterygium wilfordii HOM05D002337 ORTHO05D002412 5.4e-08 63.5 132 36.4
Cc02_g08550 Coffea canephora HOM05D002337 ORTHO05D002412 7.1e-08 63.2 291 32.3
Gohir.D10G218300 Gossypium hirsutum HOM05D002337 ORTHO05D002412 1.2e-07 62.4 244 32.8
RhsimUnG0167900 Rhododendron simsii HOM05D002337 ORTHO05D002412 1.2e-07 62.4 240 33.3
Manes.09G088200 Manihot esculenta HOM05D002337 ORTHO05D002412 1.6e-07 62.0 149 34.9
Sed0022304 Sechium edule HOM05D002337 ORTHO05D002412 1.6e-07 62.0 111 41.4
Gohir.A10G210000 Gossypium hirsutum HOM05D002337 ORTHO05D002412 2.1e-07 61.6 244 32.8
Duzib093G0383 Durio zibethinus HOM05D002337 ORTHO05D002412 2.7e-07 61.2 161 35.4
Cfa017455 Carpinus fangiana HOM05D002337 ORTHO05D002412 3.5e-07 60.8 149 32.9
Nitab4.5_0000643g0110 Nicotiana tabacum HOM05D002337 ORTHO05D002412 3.5e-07 60.8 129 38.8
QL07p046196 Quercus lobata HOM05D002337 ORTHO05D002412 3.5e-07 60.8 110 40.9
Haze_20705 Corylus avellana HOM05D002337 ORTHO05D002412 4.6e-07 60.5 149 32.9
HanXRQChr14g0453891 Helianthus annuus HOM05D002337 ORTHO05D002412 4.6e-07 60.5 131 33.6
Sabra10G0164700 Salix brachista HOM05D002337 ORTHO05D002412 4.6e-07 60.5 150 36.7
Rhsim03G0125800 Rhododendron simsii HOM05D002337 ORTHO05D002412 6.0e-07 60.1 240 33.3
DCAR_027693 Daucus carota HOM05D002337 ORTHO05D002412 7.8e-07 59.7 151 35.1
Dinv25946 Davidia involucrata HOM05D002337 ORTHO05D002412 7.8e-07 59.7 245 31.4
Dinv35665 Davidia involucrata HOM05D002337 ORTHO05D002412 1.0e-06 59.3 145 35.2
Oeu050644.1 Olea europaea HOM05D002337 ORTHO05D002412 1.0e-06 59.3 141 39.7
Atru.chr12.580 Acer truncatum HOM05D002337 ORTHO05D002412 1.3e-06 58.9 155 35.5
Ciclev10011960m.g Citrus clementina HOM05D002337 ORTHO05D002412 1.3e-06 58.9 116 37.1
CSS0046032 Camellia sinensis var. sinensis HOM05D002337 ORTHO05D002412 2.3e-06 58.2 124 38.7
HanXRQChr07g0200871 Helianthus annuus HOM05D002337 ORTHO05D002412 2.3e-06 58.2 213 33.3
TAR633G1343 Trochodendron aralioides HOM05D002337 ORTHO05D002412 2.3e-06 58.2 158 34.2
Hma1.2p1_0207F.1_g087900 Hydrangea macrophylla HOM05D002337 ORTHO05D002412 3.0e-06 57.8 142 35.9
MD12G1132800 Malus domestica HOM05D002337 ORTHO05D002412 3.0e-06 57.8 120 40.0
Nitab4.5_0006800g0030 Nicotiana tabacum HOM05D002337 ORTHO05D002412 3.0e-06 57.8 129 38.8
Potri.006G214700 Populus trichocarpa HOM05D002337 ORTHO05D002412 3.9e-06 57.4 153 35.3
Aqoxy4G03075 Aquilegia oxysepala HOM05D002337 ORTHO05D002412 5.1e-06 57.0 79 46.8
Sed0011182 Sechium edule HOM05D002337 ORTHO05D002412 5.1e-06 57.0 126 37.3
Prupe.6G246800 Prunus persica HOM05D002337 ORTHO05D002412 6.6e-06 56.6 132 37.9
Thecc.10G060300 Theobroma cacao HOM05D002337 ORTHO05D002412 6.6e-06 56.6 155 34.2
Cc06_g03190 Coffea canephora HOM05D002337 ORTHO05D002412 8.7e-06 56.2 245 30.2


User provided reference genes

Program Settings