Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g005320 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-102 375.2 185 100.0
Sopen04g005340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-78 296.2 159 92.5
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-52 209.1 194 63.4
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-51 204.1 193 62.7
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-49 200.3 198 60.6
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-48 196.4 198 59.1
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 9.3e-48 194.1 197 59.9
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-44 181.0 194 58.2
Sopen09g021900 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-39 165.6 180 56.1
Sopen03g010420 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-37 159.8 178 57.3
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 4.7e-31 138.7 184 48.4
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 9.7e-29 131.0 159 52.2
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 4.5e-26 122.1 162 50.0
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-24 117.5 72 84.7
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-24 116.7 185 40.0
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-24 116.7 144 53.5
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 2.5e-24 116.3 185 40.0
Sopen03g005290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-23 113.6 160 48.8
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 1.1e-19 100.9 78 69.2
Manes.08G105950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.1e-19 100.9 191 35.6
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-18 96.3 72 73.6
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 3.5e-18 95.9 73 65.8
Sopen06g032620 Solanum pennellii HOM05D000537 ORTHO05D000415 4.5e-18 95.5 64 78.1
Sopen09g011210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-17 94.4 84 57.1
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-17 93.6 183 38.8
Sopen01g027010 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-16 89.0 68 61.8
Sopen06g015160 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-15 86.7 134 44.8
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.0e-14 84.3 77 55.8
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.8e-14 83.6 103 41.7
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 2.3e-14 83.2 75 53.3
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 4.0e-14 82.4 187 31.6
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.8e-14 81.3 72 54.2
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 193 33.7
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-12 76.6 88 54.5
Nitab4.5_0007134g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.8e-12 76.3 73 49.3
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.7e-12 75.9 170 31.2
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.7e-12 75.9 170 31.2
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-12 75.9 52 76.9
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.3e-12 75.1 140 34.3
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.3e-12 74.7 71 43.7
Psat3g090640 Pisum sativum HOM05D000002 ORTHO05D000001 1.1e-11 74.3 149 30.2
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 1.1e-11 74.3 186 29.0
Migut.O00008 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.4e-11 73.9 152 33.6
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 1.4e-11 73.9 155 31.0
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.4e-11 73.9 171 29.8
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.1e-11 72.4 180 28.3
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 5.4e-11 72.0 194 27.8
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 7.0e-11 71.6 193 28.0
Migut.D01270 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.0e-11 71.6 61 55.7
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.1e-11 71.2 177 31.6
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-10 70.5 173 30.6
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-10 70.5 167 34.1
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.0e-10 70.1 177 29.9
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 2.7e-10 69.7 170 28.8
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 3.5e-10 69.3 210 27.6
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-10 68.6 187 27.3
Gorai.001G219800 Gossypium raimondii HOM05D000002 ORTHO05D000001 7.7e-10 68.2 128 35.2
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-09 67.8 173 30.6
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 1.0e-09 67.8 188 29.8
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.3e-09 67.4 162 27.8
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 1.3e-09 67.4 84 42.9
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-09 67.0 201 28.4
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-09 67.0 190 28.4
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.7e-09 67.0 82 35.4
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.9e-09 66.2 78 41.0
Sopen04g011370 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-09 65.5 84 46.4
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.5e-09 65.1 180 26.7
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.5e-09 65.1 188 28.7
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.5e-09 65.1 165 27.9
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 8.6e-09 64.7 81 43.2
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.5e-08 63.9 167 29.3
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 3.2e-08 62.8 76 36.8
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.5e-08 62.0 167 28.7
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.5e-08 62.0 77 39.0
CAN.G352.76 Capsicum annuum HOM05D000002 ORTHO05D000001 7.2e-08 61.6 55 49.1
Manes.13G013492 Manihot esculenta HOM05D000002 ORTHO05D000001 7.2e-08 61.6 71 36.6
TWI75G0432 Tripterygium wilfordii HOM05D017849 ORTHO05D000001 7.2e-08 61.6 144 29.2
Atru.chr13.2624 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-07 60.8 171 28.7
Sopen02g012310 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 60.8 124 36.3
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-07 60.1 71 45.1
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-07 60.1 91 36.3
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-07 60.1 186 26.3
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-07 59.7 146 31.5
Manes.18G125450 Manihot esculenta HOM05D000002 ORTHO05D000001 2.8e-07 59.7 44 59.1
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.8e-07 59.7 69 39.1
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.8e-07 59.7 154 29.2
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-07 59.3 71 40.8
COL.COLO4_16378 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.7e-07 58.9 71 39.4
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 4.7e-07 58.9 132 32.6
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 4.7e-07 58.9 72 37.5
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 6.1e-07 58.5 68 44.1
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.1e-07 58.5 71 42.3
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.1e-07 58.5 104 35.6
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.1e-07 58.5 67 46.3
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-07 58.2 67 46.3
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 8.0e-07 58.2 165 28.5
Nitab4.5_0001654g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.0e-07 58.2 75 37.3
ECA246G2243 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 57.8 95 35.8
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-06 57.8 67 38.8
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 1.0e-06 57.8 71 38.0
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 1.0e-06 57.8 71 42.3
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-06 57.8 196 27.6
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 57.0 71 39.4
MD15G1119400 Malus domestica HOM05D000056 ORTHO05D000001 1.8e-06 57.0 128 32.0
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 56.6 72 50.0
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 56.2 71 36.6
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 56.2 71 36.6
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-06 56.2 193 25.4
Eucgr.F02352 Eucalyptus grandis HOM05D000002 ORTHO05D000001 4.0e-06 55.8 145 32.4
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-06 55.8 170 30.0
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 4.0e-06 55.8 71 36.6
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.2e-06 55.5 71 36.6
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.2e-06 55.5 72 38.9
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 55.1 69 37.7
Atru.chr9.1627 Acer truncatum HOM05D000002 ORTHO05D000001 8.8e-06 54.7 73 35.6
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-06 54.7 69 36.2
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.8e-06 54.7 85 32.9


User provided reference genes

Program Settings