Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g005280 Solanum pennellii HOM05D000283 ORTHO05D006673 4.9e-64 247.7 127 100.0
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 6.0e-22 107.8 88 65.9
CAN.G786.35 Capsicum annuum HOM05D000283 ORTHO05D006673 2.5e-20 102.4 88 60.2
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 4.3e-20 101.7 92 60.9
PGSC0003DMG400011488 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.8e-18 96.3 88 60.2
PGSC0003DMG400011472 Solanum tuberosum HOM05D000283 ORTHO05D006673 5.3e-18 94.7 88 60.2
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 9.0e-18 94.0 93 59.1
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 2.6e-17 92.4 93 58.1
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.0e-16 90.5 89 59.6
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.0e-16 90.5 89 59.6
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 1.3e-16 90.1 93 58.1
PGSC0003DMG400011471 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.3e-16 90.1 88 56.8
PGSC0003DMG400011487 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.7e-16 89.7 88 60.2
PGSC0003DMG400039757 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.4e-15 86.7 88 55.7
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-12 75.5 88 51.1
Sopen04g005330 Solanum pennellii HOM05D000283 ORTHO05D006673 4.3e-12 75.1 88 52.3
Sopen04g005350 Solanum pennellii HOM05D000283 ORTHO05D006673 1.3e-11 73.6 77 58.4
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 8.2e-11 70.9 88 51.1
Solyc04g010155.2 Solanum lycopersicum HOM05D000283 ORTHO05D006673 5.3e-10 68.2 83 51.8
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 4.5e-09 65.1 85 44.7
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 5.9e-09 64.7 90 44.4
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 1.0e-08 63.9 81 48.1
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.3e-08 63.5 91 45.1
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.3e-08 63.5 91 45.1
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 1.7e-08 63.2 89 43.8
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 3.8e-08 62.0 90 42.2
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 5.0e-08 61.6 89 39.3
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 6.5e-08 61.2 92 42.4
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 6.5e-08 61.2 89 46.1
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 5.5e-07 58.2 90 41.1
PGSC0003DMG400011484 Solanum tuberosum HOM05D000283 ORTHO05D006673 5.5e-07 58.2 50 66.0
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 2.1e-06 56.2 90 38.9
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 2.1e-06 56.2 90 43.3
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 2.7e-06 55.8 104 35.6
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 2.7e-06 55.8 88 39.8
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 4.7e-06 55.1 89 39.3
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 4.7e-06 55.1 89 39.3
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 6.1e-06 54.7 84 41.7
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 7.9e-06 54.3 82 43.9
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 7.9e-06 54.3 88 39.8


User provided reference genes

Program Settings