Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g004630 Solanum pennellii HOM05D000840 ORTHO05D000670 8.1e-80 300.4 161 100.0
Sopen04g004660 Solanum pennellii HOM05D000840 ORTHO05D000670 2.3e-18 96.3 104 57.7
CAN.G186.26 Capsicum annuum HOM05D000840 ORTHO05D000670 1.5e-17 93.6 101 54.5
PGSC0003DMG400045790 Solanum tuberosum HOM05D000840 ORTHO05D000670 2.0e-17 93.2 94 60.6
Solyc04g018005.1 Solanum lycopersicum HOM05D000840 ORTHO05D000670 9.7e-17 90.9 91 56.0
Sopen04g004650 Solanum pennellii HOM05D000840 ORTHO05D000670 9.7e-17 90.9 93 54.8
Solyc04g017873.1 Solanum lycopersicum HOM05D000840 ORTHO05D000670 1.3e-16 90.5 91 56.0
Solyc04g017925.1 Solanum lycopersicum HOM05D000840 ORTHO05D000670 1.3e-16 90.5 91 56.0
PGSC0003DMG400034539 Solanum tuberosum HOM05D000840 ORTHO05D000670 1.1e-15 87.4 89 57.3
Nitab4.5_0010235g0010 Nicotiana tabacum HOM05D000840 ORTHO05D000670 1.8e-15 86.7 102 52.9
PGSC0003DMG400040517 Solanum tuberosum HOM05D000840 ORTHO05D000670 1.8e-15 86.7 111 51.4
Solyc04g017945.1 Solanum lycopersicum HOM05D000840 ORTHO05D000670 4.1e-15 85.5 91 53.8
CAN.G186.7 Capsicum annuum HOM05D000840 ORTHO05D000670 6.9e-15 84.7 133 43.6
Nitab4.5_0004104g0090 Nicotiana tabacum HOM05D000840 ORTHO05D000670 1.5e-14 83.6 115 46.1
Nitab4.5_0004105g0020 Nicotiana tabacum HOM05D000840 ORTHO05D000670 4.5e-14 82.0 115 45.2
Peaxi162Scf00583g00535 Petunia axillaris HOM05D000840 ORTHO05D000670 6.1e-11 71.6 113 41.6
Peaxi162Scf00583g00536 Petunia axillaris HOM05D000840 ORTHO05D000670 8.0e-11 71.2 115 46.1
CiPaw.01G251200 Carya illinoinensis HOM05D000840 ORTHO05D000670 8.8e-10 67.8 96 43.8
Sopen04g004640 Solanum pennellii HOM05D000840 ORTHO05D000670 2.0e-09 66.6 320 27.8
Manes.04G107400 Manihot esculenta HOM05D000840 ORTHO05D000670 3.3e-09 65.9 102 43.1
Sabra03G0016100 Salix brachista HOM05D000840 ORTHO05D000670 5.7e-09 65.1 101 41.6
Manes.11G061900 Manihot esculenta HOM05D000840 ORTHO05D000670 7.4e-09 64.7 106 41.5
MSTRG.20450 Avicennia marina HOM05D000840 ORTHO05D000670 1.3e-08 63.9 110 39.1
SalBow8G1535 Salvia bowleyana HOM05D000840 ORTHO05D000670 1.7e-08 63.5 97 41.2
Potri.003G012400 Populus trichocarpa HOM05D000840 ORTHO05D000670 2.2e-08 63.2 97 43.3
Sabra03G0015900 Salix brachista HOM05D000840 ORTHO05D000670 2.8e-08 62.8 101 40.6
SGA_v2.0_scaffold172G38982 Striga asiatica HOM05D000840 ORTHO05D000670 4.8e-08 62.0 96 39.6
Prupe.6G027500 Prunus persica HOM05D000840 ORTHO05D000670 6.3e-08 61.6 96 41.7
Gohir.A05G121700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 8.2e-08 61.2 96 41.7
Ah.10g029760 Amaranthus hybridus HOM05D000840 ORTHO05D000670 1.4e-07 60.5 122 36.9
Cc00_g11640 Coffea canephora HOM05D000840 ORTHO05D000670 1.4e-07 60.5 88 39.8
Lj7C492G1 Lonicera japonica HOM05D000840 ORTHO05D000670 1.4e-07 60.5 113 38.1
Sc14g0004830 Simmondsia chinensis HOM05D000840 ORTHO05D000670 1.4e-07 60.5 107 40.2
Ciclev10024717m.g Citrus clementina HOM05D000840 ORTHO05D000670 1.8e-07 60.1 97 43.3
Cc00_g09670 Coffea canephora HOM05D000840 ORTHO05D000670 1.8e-07 60.1 97 41.2
Haze_16616 Corylus avellana HOM05D000840 ORTHO05D000670 2.4e-07 59.7 101 40.6
RcHm_v2.0_Chr5g0075871 Rosa chinensis HOM05D000840 ORTHO05D000670 2.4e-07 59.7 101 40.6
Potri.003G028089 Populus trichocarpa HOM05D000840 ORTHO05D000670 3.1e-07 59.3 96 41.7
FAN25G1451 Fragaria x ananassa HOM05D000840 ORTHO05D000670 4.1e-07 58.9 101 39.6
FAN21G2894 Fragaria x ananassa HOM05D000840 ORTHO05D000670 5.3e-07 58.5 101 39.6
Haze_16613 Corylus avellana HOM05D000840 ORTHO05D000670 7.0e-07 58.2 96 39.6
FvH4_3g42370 Fragaria vesca HOM05D000840 ORTHO05D000670 7.0e-07 58.2 101 39.6
FAN11G2882 Fragaria x ananassa HOM05D000840 ORTHO05D000670 7.0e-07 58.2 101 39.6
FAN28G2945 Fragaria x ananassa HOM05D000840 ORTHO05D000670 7.0e-07 58.2 101 39.6
Lju1220C1T6 Lonicera japonica HOM05D000840 ORTHO05D000670 7.0e-07 58.2 89 41.6
TAR633G0986 Trochodendron aralioides HOM05D000840 ORTHO05D000670 7.0e-07 58.2 101 43.6
Cfa001928 Carpinus fangiana HOM05D000840 ORTHO05D000670 9.1e-07 57.8 96 39.6
Dinv31992 Davidia involucrata HOM05D000840 ORTHO05D000670 9.1e-07 57.8 114 37.7
Gorai.009G126200 Gossypium raimondii HOM05D000840 ORTHO05D000670 1.2e-06 57.4 96 40.6
Phvul.005G180200 Phaseolus vulgaris HOM05D000840 ORTHO05D000670 1.2e-06 57.4 111 36.9
Thecc.06G034100 Theobroma cacao HOM05D000840 ORTHO05D000670 1.2e-06 57.4 96 39.6
VMungo1080G0802 Vigna mungo HOM05D000840 ORTHO05D000670 1.2e-06 57.4 109 38.5
CANSAT56G3623 Cannabis sativa HOM05D000840 ORTHO05D000670 2.0e-06 56.6 98 39.8
Migut.B01095 Erythranthe guttata HOM05D000840 ORTHO05D000670 2.0e-06 56.6 97 40.2
Gorai.011G085600 Gossypium raimondii HOM05D000840 ORTHO05D000670 2.0e-06 56.6 96 39.6
Potri.003G028401 Populus trichocarpa HOM05D000840 ORTHO05D000670 2.0e-06 56.6 116 33.6
MD11G1036600 Malus domestica HOM05D000840 ORTHO05D000670 3.5e-06 55.8 96 40.6
CSS0003676 Camellia sinensis var. sinensis HOM05D000840 ORTHO05D000670 4.5e-06 55.5 120 38.3
Glyma.15G005500 Glycine max HOM05D000840 ORTHO05D000670 4.5e-06 55.5 110 38.2
MD02G1272400 Malus domestica HOM05D000840 ORTHO05D000670 4.5e-06 55.5 96 37.5
QL05p033046 Quercus lobata HOM05D000840 ORTHO05D000670 4.5e-06 55.5 107 36.4
Thecc.06G034400 Theobroma cacao HOM05D000840 ORTHO05D000670 4.5e-06 55.5 96 38.5
Aqoxy1G00094 Aquilegia oxysepala HOM05D000840 ORTHO05D000670 5.9e-06 55.1 97 35.1
Gohir.D10G078800 Gossypium hirsutum HOM05D000840 ORTHO05D000670 5.9e-06 55.1 96 39.6
Potri.003G013000 Populus trichocarpa HOM05D000840 ORTHO05D000670 5.9e-06 55.1 101 37.6
Glyma.13G367700 Glycine max HOM05D000840 ORTHO05D000670 7.7e-06 54.7 110 37.3
Gohir.A10G072300 Gossypium hirsutum HOM05D000840 ORTHO05D000670 7.7e-06 54.7 96 39.6
Lj3g0027916 Lotus japonicus HOM05D000840 ORTHO05D000670 7.7e-06 54.7 89 40.4


User provided reference genes

Program Settings