Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g004620 Solanum pennellii HOM05D000003 ORTHO05D000004 6.5e-60 233.8 113 100.0
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.7e-12 76.3 50 64.0
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-11 71.2 55 58.2
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-10 69.3 89 42.7
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 2.1e-10 69.3 83 43.4
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 6.2e-10 67.8 49 59.2
PGSC0003DMG400019551 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.2e-10 67.8 65 43.1
Sopen06g010980 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-09 67.0 51 56.9
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-09 66.6 51 56.9
CSS0033313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-09 66.2 52 55.8
CSS0007786 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-09 65.1 52 53.8
CSS0043417 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-09 65.1 51 54.9
PGSC0003DMG400028654 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.0e-09 65.1 51 54.9
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.8e-09 64.3 79 40.5
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.9e-09 63.9 84 44.0
GSVIVG01004123001 Vitis vinifera HOM05D000003 ORTHO05D000004 8.9e-09 63.9 108 39.8
Nitab4.5_0000592g0230 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.2e-08 63.5 50 52.0
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-08 62.4 74 41.9
CSS0007662 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-08 62.0 51 54.9
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-08 62.0 49 55.1
CSS0035702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-08 62.0 49 55.1
PGSC0003DMG400032796 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.4e-08 62.0 44 61.4
Aqoxy7G01438 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-08 61.6 51 54.9
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-08 61.6 50 54.0
ClCG08G005070 Citrullus lanatus HOM05D000003 ORTHO05D016241 4.4e-08 61.6 80 41.2
QL02p026579 Quercus lobata HOM05D003230 ORTHO05D003680 5.8e-08 61.2 108 33.3
HanXRQChr14g0451141 Helianthus annuus HOM05D000003 ORTHO05D000004 7.5e-08 60.8 81 39.5
Sopen07g006490 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-08 60.8 119 35.3
Aqoxy5G02109 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.9e-08 60.5 61 49.2
Aqoxy6G02429 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.9e-08 60.5 51 54.9
CSS0048351 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-07 60.1 49 53.1
Sed0015894 Sechium edule HOM05D000003 ORTHO05D000004 1.7e-07 59.7 51 45.1
Aqoxy1G03268 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-07 59.3 51 51.0
PSO151G0217 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-07 59.3 51 51.0
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.2e-07 59.3 96 35.4
ECA238G3311 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.9e-07 58.9 81 43.2
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 2.9e-07 58.9 110 32.7
Zm00001eb299710 Zea mays HOM05D000003 ORTHO05D000004 2.9e-07 58.9 51 60.8
CANSAT01G3175 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-07 58.5 51 49.0
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.9e-07 58.2 50 48.0
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 4.9e-07 58.2 93 35.5
Aqoxy7G02361 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.4e-07 57.8 51 47.1
Medtr2g437490 Medicago truncatula HOM05D000003 ORTHO05D000004 6.4e-07 57.8 50 52.0
QL05p052088 Quercus lobata HOM05D000619 ORTHO05D002839 6.4e-07 57.8 103 35.0
PGSC0003DMG400000854 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.4e-07 57.8 48 52.1
Zm00001eb068500 Zea mays HOM05D000003 ORTHO05D000004 6.4e-07 57.8 51 58.8
PSO384G3926 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-07 57.4 53 41.5
Zm00001eb243980 Zea mays HOM05D018071 ORTHO05D000004 8.3e-07 57.4 56 53.6
PSO210G3134 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 57.0 51 43.1
PSO478G4146 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 57.0 53 45.3
TPR.G18886 Trifolium pratense HOM05D000005 ORTHO05D000012 1.1e-06 57.0 51 49.0
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 74 36.5
Medtr3g435820 Medicago truncatula HOM05D000003 ORTHO05D000004 1.4e-06 56.6 105 33.3
Hund20535 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 51 45.1
GSVIVG01004860001 Vitis vinifera HOM05D000660 ORTHO05D000766 1.4e-06 56.6 51 49.0
Aqoxy6G01480 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-06 56.2 108 31.5
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 56.2 51 45.1
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 1.9e-06 56.2 51 51.0
Zm00001eb291430 Zea mays HOM05D000003 ORTHO05D000004 1.9e-06 56.2 51 58.8
Aa31sc24G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 55.8 52 48.1
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-06 55.8 51 47.1
Aqoxy4G01023 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-06 55.8 51 47.1
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-06 55.8 52 44.2
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 2.4e-06 55.8 51 47.1
ClCG07G008810 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.4e-06 55.8 51 45.1
PSO509G0038 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-06 55.8 52 42.3
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-06 55.5 50 50.0
CiPaw.04G044700 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.2e-06 55.5 49 53.1
Os11g0672600 Oryza sativa ssp. japonica HOM05D000003 ORTHO05D000004 3.2e-06 55.5 50 50.0
PSO384G2607 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 55.5 65 44.6
PSO513G0072 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 55.5 58 44.8
QL11p018593 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-06 55.5 108 32.4
Hund30603 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.2e-06 55.5 51 47.1
Hund30604 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.2e-06 55.5 51 47.1
CiPaw.03G178800 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.1e-06 55.1 50 50.0
HanXRQChr17g0536011 Helianthus annuus HOM05D000003 ORTHO05D000004 4.1e-06 55.1 79 38.0
MBI04_g29853_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.1e-06 55.1 49 44.9
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-06 55.1 108 32.4
QL10p033496 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-06 55.1 108 32.4
Aqoxy1G03216 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.4e-06 54.7 93 32.3
Cpa.g.sc11.133 Carica papaya HOM05D000003 ORTHO05D000004 5.4e-06 54.7 87 37.9
MBI18_g09655_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.4e-06 54.7 50 50.0
Hund12693 Selenicereus undatus HOM05D001165 ORTHO05D000004 5.4e-06 54.7 65 41.5
Aqoxy2G01405 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.1e-06 54.3 79 32.9
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.1e-06 54.3 51 49.0
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.1e-06 54.3 51 45.1
ClCG04G012890 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.1e-06 54.3 51 43.1
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-06 54.3 51 45.1
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 54.3 58 43.1
QL03p020243 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-06 54.3 96 33.3
TPR.G40382 Trifolium pratense HOM05D000003 ORTHO05D000004 7.1e-06 54.3 50 46.0
CAN.G1928.2 Capsicum annuum HOM05D001304 ORTHO05D007800 9.2e-06 53.9 53 50.9
PSO013G0097 Papaver somniferum HOM05D000003 ORTHO05D000004 9.2e-06 53.9 94 34.0
PSO017G5413 Papaver somniferum HOM05D000003 ORTHO05D000004 9.2e-06 53.9 58 41.4


User provided reference genes

Program Settings