Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g003130 Solanum pennellii HOM05D007313 ORTHO05D005299 1.4e-31 139.0 71 100.0
Solyc04g007990.1 Solanum lycopersicum HOM05D007313 ORTHO05D005299 2.6e-30 134.8 71 97.2
PGSC0003DMG400029516 Solanum tuberosum HOM05D007313 ORTHO05D005299 7.8e-27 123.2 71 93.0
DCAR_023578 Daucus carota HOM05D007313 ORTHO05D005299 6.0e-11 70.5 56 62.5
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 1.7e-10 68.9 56 66.1
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.7e-10 68.9 77 55.8
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 1.7e-10 68.9 60 68.3
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 3.9e-10 67.8 81 58.0
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.1e-09 66.2 77 54.5
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 2.5e-09 65.1 76 51.3
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.5e-09 65.1 78 55.1
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.5e-09 65.1 78 55.1
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 2.5e-09 65.1 78 55.1
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 3.3e-09 64.7 85 49.4
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 5.6e-09 63.9 54 64.8
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 5.6e-09 63.9 54 64.8
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 7.3e-09 63.5 71 56.3
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 9.5e-09 63.2 84 53.6
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 9.5e-09 63.2 54 66.7
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 1.2e-08 62.8 65 58.5
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 2.1e-08 62.0 84 52.4
Migut.E00472 Erythranthe guttata HOM05D007313 ORTHO05D005299 2.8e-08 61.6 76 50.0
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 3.6e-08 61.2 64 57.8
ECA233G5799 Erigeron canadensis HOM05D007313 ORTHO05D005299 6.2e-08 60.5 64 53.1
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 8.1e-08 60.1 64 56.2
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 1.4e-07 59.3 53 62.3
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 1.4e-07 59.3 54 61.1
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 3.1e-07 58.2 61 59.0
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 3.1e-07 58.2 59 57.6
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 4.0e-07 57.8 79 48.1
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 5.2e-07 57.4 79 48.1
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 6.8e-07 57.0 66 51.5
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 6.8e-07 57.0 68 55.9
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 1.2e-06 56.2 64 54.7
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 2.0e-06 55.5 64 54.7
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 2.0e-06 55.5 51 60.8
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 2.6e-06 55.1 64 54.7
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 3.4e-06 54.7 75 52.0
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 3.4e-06 54.7 63 54.0
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 3.4e-06 54.7 65 52.3
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 3.4e-06 54.7 65 52.3
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 3.4e-06 54.7 65 53.8
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 3.4e-06 54.7 65 52.3
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 3.4e-06 54.7 65 52.3
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 3.4e-06 54.7 65 53.8
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 3.4e-06 54.7 71 47.9
Potri.010G107200 Populus trichocarpa HOM05D007313 ORTHO05D005299 3.4e-06 54.7 53 62.3
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 3.4e-06 54.7 73 52.1
AT1G24600 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 4.4e-06 54.3 66 47.0
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 4.4e-06 54.3 62 54.8
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 4.4e-06 54.3 62 54.8
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 4.4e-06 54.3 62 54.8
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 5.8e-06 53.9 62 54.8
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 5.8e-06 53.9 62 54.8
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 5.8e-06 53.9 68 48.5
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 5.8e-06 53.9 64 56.2
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 5.8e-06 53.9 71 49.3
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 9.9e-06 53.1 77 48.1
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 9.9e-06 53.1 55 54.5


User provided reference genes

Program Settings