Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 8.2e-199 696.8 340 100.0
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 3.8e-188 661.4 341 95.9
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.6e-186 656.0 340 95.0
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 3.7e-151 538.5 353 77.1
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 9.1e-150 533.9 347 77.8
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 9.5e-139 497.3 364 69.8
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 4.1e-126 455.3 267 78.7
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 5.2e-121 438.3 258 77.1
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.0e-120 436.4 338 67.2
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 5.8e-120 434.9 263 75.3
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 7.6e-120 434.5 253 77.9
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 9.9e-120 434.1 290 69.0
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 3.2e-118 429.1 256 76.6
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 3.2e-118 429.1 260 75.0
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 2.1e-117 426.4 347 60.5
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 3.5e-117 425.6 261 73.2
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 3.0e-116 422.5 262 74.8
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 3.0e-116 422.5 268 73.9
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 3.9e-116 422.2 258 76.0
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 5.1e-116 421.8 289 70.2
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 2.5e-115 419.5 255 75.3
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 7.3e-115 417.9 260 75.8
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 9.6e-115 417.5 277 69.3
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 9.6e-115 417.5 261 73.2
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.2e-114 417.2 262 73.7
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 2.1e-114 416.4 261 72.0
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 3.6e-114 415.6 257 72.8
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 4.7e-114 415.2 258 73.3
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 6.2e-114 414.8 293 66.2
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 1.1e-113 414.1 256 75.0
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.8e-113 413.3 272 70.6
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.8e-113 413.3 272 70.6
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 2.4e-113 412.9 257 73.9
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.1e-113 412.5 258 72.5
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 4.0e-113 412.1 270 70.7
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 4.0e-113 412.1 306 65.4
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 2.0e-112 409.8 257 72.0
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 4.4e-112 408.7 254 72.0
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 4.4e-112 408.7 277 69.7
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 4.4e-112 408.7 331 60.4
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 5.8e-112 408.3 260 71.5
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 7.6e-112 407.9 254 72.0
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 9.9e-112 407.5 260 71.2
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.3e-111 407.1 256 72.7
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 6.4e-111 404.8 267 68.9
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 3.2e-110 402.5 335 61.2
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 4.2e-110 402.1 283 67.1
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 5.4e-110 401.7 270 68.5
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 5.4e-110 401.7 255 71.0
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.4e-110 401.7 255 71.0
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 5.4e-110 401.7 255 71.0
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 5.4e-110 401.7 259 69.5
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 5.4e-110 401.7 347 57.3
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 9.3e-110 401.0 256 70.3
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.6e-109 400.2 258 70.9
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 2.1e-109 399.8 256 70.7
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 2.1e-109 399.8 258 70.5
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 3.5e-109 399.1 257 68.1
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 3.5e-109 399.1 258 70.5
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.5e-109 399.1 271 69.0
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 6.0e-109 398.3 256 70.3
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 1.7e-108 396.7 258 72.1
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.7e-108 396.7 260 70.0
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 3.9e-108 395.6 256 68.8
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 5.1e-108 395.2 303 61.1
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 1.1e-107 394.0 263 68.1
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.1e-107 394.0 257 72.8
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.9e-107 393.3 257 67.7
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.9e-107 393.3 256 72.3
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 5.6e-107 391.7 263 65.8
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 3.6e-106 389.0 288 63.2
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 4.8e-106 388.7 248 69.8
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 2.0e-104 383.3 267 67.0
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 2.6e-104 382.9 248 68.1
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 4.4e-104 382.1 297 60.6
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 9.9e-104 380.9 229 78.2
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 3.8e-103 379.0 223 77.6
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 6.4e-103 378.3 226 75.2
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 2.4e-102 376.3 228 75.9
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 3.2e-102 375.9 252 65.9
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 3.6e-98 362.5 233 70.0
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 1.5e-91 340.5 264 63.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 1.5e-88 330.5 269 58.7
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 8.7e-84 314.7 258 59.7
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 2.8e-82 309.7 267 56.2
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.1e-81 307.8 228 63.2
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 2.4e-81 306.6 216 65.3
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 8.4e-79 298.1 182 74.2
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.9e-78 297.0 317 47.0
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 2.5e-78 296.6 182 73.6
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 7.1e-78 295.0 198 65.7
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 9.3e-78 294.7 192 70.3
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 3.5e-77 292.7 233 59.2
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 3.5e-77 292.7 233 59.2
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.5e-75 287.3 182 73.1
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 1.2e-72 277.7 253 56.1
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 1.6e-69 267.3 164 72.0
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.0e-68 263.1 177 67.8
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.5e-67 260.8 238 50.8
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 2.0e-64 250.4 168 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 5.0e-63 245.7 229 52.0
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 2.2e-58 230.3 194 57.7
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.3e-55 221.1 277 43.0
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.3e-55 221.1 277 43.0
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 2.7e-53 213.4 184 57.1
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 5.7e-51 205.7 119 78.2
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 4.7e-45 186.0 133 61.7
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-43 181.0 133 60.2
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.1e-37 160.6 133 56.4
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.0e-36 156.4 238 37.0
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 3.1e-33 146.7 101 67.3
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 5.2e-28 129.4 78 71.8
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 4.4e-27 126.3 92 63.0
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 2.9e-26 123.6 249 34.9
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 3.2e-25 120.2 256 32.8
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 9.8e-19 98.6 63 69.8
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 8.3e-18 95.5 262 28.6


User provided reference genes

Program Settings