Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 6.6e-69 263.8 127 100.0
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 8.6e-69 263.5 127 99.2
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 1.5e-65 252.7 127 95.3
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 3.0e-45 185.3 115 78.3
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 5.6e-44 181.0 121 75.2
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 4.8e-43 177.9 132 68.9
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 6.9e-42 174.1 133 69.2
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 4.5e-41 171.4 136 66.2
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 1.4e-39 166.4 129 65.9
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 3.2e-39 165.2 133 66.2
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 7.1e-39 164.1 132 66.7
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 1.6e-38 162.9 126 65.1
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 2.7e-38 162.2 133 60.2
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 1.3e-37 159.8 130 65.4
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 1.4e-34 149.8 136 58.8
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 1.4e-34 149.8 136 58.8
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 1.4e-34 149.8 112 65.2
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.4e-34 149.8 128 60.2
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 3.1e-34 148.7 147 57.8
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 5.3e-34 147.9 133 58.6
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 6.9e-34 147.5 126 59.5
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 6.9e-34 147.5 136 59.6
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 1.3e-32 143.3 133 59.4
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 3.8e-32 141.7 138 56.5
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 3.8e-32 141.7 129 58.1
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 4.9e-32 141.4 121 60.3
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 6.4e-32 141.0 136 57.4
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 6.4e-32 141.0 126 60.3
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 8.4e-32 140.6 128 57.8
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 1.1e-31 140.2 132 57.6
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 1.1e-31 140.2 120 58.3
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 1.4e-31 139.8 121 61.2
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 1.4e-31 139.8 131 56.5
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 1.9e-31 139.4 120 58.3
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 1.9e-31 139.4 137 54.7
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 3.2e-31 138.7 120 57.5
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 3.2e-31 138.7 126 57.9
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 4.2e-31 138.3 122 59.8
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 5.5e-31 137.9 120 60.8
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 5.5e-31 137.9 120 60.8
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 5.5e-31 137.9 134 56.0
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 5.5e-31 137.9 119 62.2
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 5.5e-31 137.9 139 54.0
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 5.5e-31 137.9 130 57.7
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 7.1e-31 137.5 122 59.0
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 9.3e-31 137.1 120 56.7
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 9.3e-31 137.1 117 59.0
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 1.2e-30 136.7 133 54.1
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 1.6e-30 136.3 120 57.5
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 1.6e-30 136.3 136 58.1
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.6e-30 136.3 118 63.6
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.1e-30 136.0 130 56.9
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 2.7e-30 135.6 120 58.3
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 2.7e-30 135.6 120 58.3
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 2.7e-30 135.6 135 55.6
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 3.5e-30 135.2 118 58.5
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 3.5e-30 135.2 114 61.4
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 6.0e-30 134.4 115 60.9
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 6.0e-30 134.4 120 58.3
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 6.0e-30 134.4 127 55.1
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 1.0e-29 133.7 115 60.9
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 1.0e-29 133.7 123 58.5
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 1.3e-29 133.3 135 55.6
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 2.3e-29 132.5 137 54.7
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 2.3e-29 132.5 119 58.8
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 5.1e-29 131.3 136 52.9
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 6.7e-29 131.0 115 60.0
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 6.7e-29 131.0 121 56.2
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 6.7e-29 131.0 117 57.3
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 8.7e-29 130.6 121 55.4
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 8.7e-29 130.6 121 55.4
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.1e-28 130.2 123 58.5
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 1.1e-28 130.2 131 55.0
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 1.5e-28 129.8 124 54.8
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 2.5e-28 129.0 119 53.8
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 2.5e-28 129.0 132 54.5
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 2.5e-28 129.0 133 51.9
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 5.6e-28 127.9 122 55.7
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 5.6e-28 127.9 134 53.7
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 9.6e-28 127.1 183 43.7
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 2.1e-27 125.9 113 61.1
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 2.8e-27 125.6 93 67.7
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 6.2e-27 124.4 126 50.8
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 8.2e-27 124.0 124 51.6
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.1e-26 123.6 132 51.5
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.1e-26 123.6 128 55.5
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 5.3e-26 121.3 121 52.9
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 1.5e-25 119.8 68 80.9
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 2.6e-25 119.0 127 52.0
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 2.6e-25 119.0 131 52.7
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 3.4e-25 118.6 127 53.5
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 3.4e-25 118.6 122 54.1
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.4e-25 118.6 60 86.7
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 4.5e-25 118.2 130 51.5
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 4.5e-25 118.2 122 53.3
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 5.8e-25 117.9 124 49.2
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 5.8e-25 117.9 134 47.8
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 1.0e-24 117.1 121 51.2
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 1.0e-24 117.1 110 56.4
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 1.3e-24 116.7 114 56.1
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 3.8e-24 115.2 127 50.4
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 3.8e-24 115.2 123 52.0
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 4.9e-24 114.8 124 53.2
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 4.9e-24 114.8 114 54.4
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 6.5e-24 114.4 102 59.8
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 3.2e-23 112.1 92 63.0
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 4.2e-23 111.7 121 49.6
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 4.2e-23 111.7 121 49.6
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 5.5e-23 111.3 126 48.4
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 5.5e-23 111.3 88 63.6
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 1.2e-22 110.2 121 51.2
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 1.2e-22 110.2 61 77.0
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 1.6e-22 109.8 62 74.2
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 2.1e-22 109.4 111 54.1
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 2.7e-22 109.0 64 75.0
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 2.7e-22 109.0 153 41.2
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 3.5e-22 108.6 115 53.9
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 1.8e-21 106.3 62 75.8
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 1.8e-21 106.3 121 51.2
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 2.3e-21 105.9 104 54.8
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 1.5e-20 103.2 106 55.7
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 1.3e-19 100.1 124 48.4
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 2.8e-19 99.0 85 63.5
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 4.8e-19 98.2 121 48.8
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 4.8e-19 98.2 88 61.4
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 1.4e-18 96.7 108 56.5
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 1.8e-18 96.3 109 48.6
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 5.3e-18 94.7 91 62.6
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 5.3e-18 94.7 91 62.6
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 6.9e-18 94.4 108 55.6
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.3e-16 90.1 95 52.6
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 2.9e-16 89.0 51 72.5
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 8.5e-16 87.4 92 48.9
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 4.2e-15 85.1 50 70.0
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 7.2e-15 84.3 68 54.4
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 9.4e-15 84.0 166 36.7
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 2.3e-13 79.3 55 63.6
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 3.0e-13 79.0 95 45.3
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 5.1e-13 78.2 66 63.6
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 8.8e-13 77.4 129 40.3
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 3.3e-12 75.5 49 63.3
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 2.8e-11 72.4 50 78.0
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 2.8e-11 72.4 102 46.1
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 3.1e-10 68.9 38 78.9
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 2.0e-09 66.2 95 47.4
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.1e-07 60.5 98 44.9
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.1e-07 60.5 37 75.7
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 7.2e-07 57.8 76 48.7
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 9.4e-07 57.4 49 51.0


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