Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 1.1e-184 649.8 328 100.0
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.0e-182 643.3 328 99.1
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.5e-173 612.1 339 92.3
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 4.4e-165 584.7 312 94.2
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.5e-149 533.1 330 82.4
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.4e-147 526.6 308 88.0
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 7.5e-141 504.2 319 77.4
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.7e-137 493.0 270 92.6
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.9e-137 492.3 321 75.1
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 5.0e-137 491.5 321 76.3
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 5.0e-137 491.5 328 75.9
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 5.6e-136 488.0 321 75.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.5e-136 487.3 321 74.8
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.6e-135 486.5 320 75.3
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.8e-135 485.7 319 74.9
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 3.6e-135 485.3 320 74.7
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.0e-134 483.8 321 74.1
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.8e-134 483.0 320 75.6
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 3.0e-134 482.3 328 74.7
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 5.2e-134 481.5 321 74.1
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.9e-134 480.7 321 74.5
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.2e-133 480.3 318 75.8
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.6e-133 479.2 318 76.1
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 4.4e-133 478.4 319 75.9
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 6.4e-132 474.6 318 74.8
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 8.3e-132 474.2 324 72.5
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.1e-131 473.8 321 73.5
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 2.4e-131 472.6 319 74.3
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 5.4e-131 471.5 327 72.2
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 9.2e-131 470.7 321 73.2
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 2.0e-130 469.5 322 73.9
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 2.7e-130 469.2 327 72.5
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.7e-129 466.5 330 71.8
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.3e-129 466.1 327 72.8
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 5.0e-129 464.9 316 73.4
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 3.3e-128 462.2 318 72.6
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 4.3e-128 461.8 323 71.8
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.2e-127 460.3 319 70.5
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.2e-127 460.3 327 72.2
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.6e-127 459.9 325 72.3
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.1e-127 459.5 331 70.4
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.8e-126 456.4 319 71.8
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.8e-126 456.4 329 71.4
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 2.3e-126 456.1 324 71.0
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 2.3e-126 456.1 326 72.4
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 3.1e-126 455.7 326 72.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 3.1e-126 455.7 318 73.0
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 6.8e-126 454.5 319 70.2
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.5e-125 453.4 326 68.4
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.5e-125 453.4 319 70.2
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 2.0e-125 453.0 321 69.5
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 7.5e-125 451.1 328 70.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.7e-124 449.9 326 68.7
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.2e-124 449.5 320 69.7
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 2.9e-124 449.1 326 72.1
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 3.7e-124 448.7 322 70.8
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 3.7e-124 448.7 326 70.2
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 3.7e-124 448.7 318 70.8
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 4.9e-124 448.4 319 68.7
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.4e-123 446.8 318 71.1
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.4e-123 446.8 318 71.1
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.9e-123 446.4 327 70.6
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 9.2e-123 444.1 318 70.4
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.6e-122 443.4 318 71.1
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.0e-122 443.0 322 68.9
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 2.7e-122 442.6 322 68.0
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.7e-122 442.6 322 69.3
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 6.0e-122 441.4 322 67.7
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 7.8e-122 441.0 311 72.3
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.0e-121 440.7 328 69.8
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 1.7e-121 439.9 318 70.4
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 3.0e-121 439.1 322 67.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 3.9e-121 438.7 319 68.3
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 8.6e-121 437.6 319 68.3
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 3.6e-119 432.2 318 68.6
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 6.2e-119 431.4 334 66.8
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.3e-118 429.5 281 74.4
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.3e-116 423.7 318 68.2
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 8.3e-116 421.0 327 67.3
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 3.2e-115 419.1 320 68.4
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.8e-110 403.3 324 64.2
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 8.9e-110 401.0 279 71.0
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 4.4e-109 398.7 388 58.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.7e-108 395.6 320 64.7
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 7.3e-104 381.3 323 62.8
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 4.7e-103 378.6 346 59.8
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 3.1e-102 375.9 319 60.8
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.5e-101 373.6 317 63.1
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.4e-99 367.1 391 53.5
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 3.5e-98 362.5 319 61.1
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 2.1e-95 353.2 346 58.7
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.1e-90 336.7 318 56.3
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 6.6e-89 331.6 326 54.6
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.9e-83 313.5 227 70.0
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 2.1e-82 310.1 320 52.5
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 3.0e-81 306.2 205 75.1
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 1.1e-67 261.2 294 49.7
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 3.1e-62 243.0 275 51.6
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.3e-55 221.1 362 39.5
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 3.4e-53 213.0 299 42.5
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.3e-48 196.4 185 60.0
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 5.3e-46 189.1 195 53.3
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 8.5e-44 181.8 163 57.7
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 6.7e-41 172.2 115 68.7
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.7e-40 169.1 104 78.8
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.2e-36 157.1 106 70.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 2.5e-19 100.5 229 34.9
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 8.6e-12 75.5 49 65.3
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.3e-11 73.6 78 53.8
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.2e-10 71.6 51 64.7
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 1.7e-07 61.2 83 42.2
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 5.4e-06 56.2 81 40.7


User provided reference genes

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