Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 3.0e-122 441.8 214 100.0
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 4.6e-38 162.2 218 51.4
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 7.8e-30 134.8 175 48.6
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 2.1e-27 126.7 105 68.6
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 8.1e-27 124.8 212 39.2
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 8.1e-27 124.8 205 39.5
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.4e-26 124.0 192 41.7
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 1.8e-26 123.6 191 41.4
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 3.1e-26 122.9 193 42.5
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 8.9e-26 121.3 191 41.4
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 8.9e-26 121.3 195 41.0
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.9e-26 121.3 214 38.3
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 8.9e-26 121.3 194 41.8
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 1.2e-25 120.9 195 40.5
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 2.0e-25 120.2 215 37.7
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 3.4e-25 119.4 207 38.6
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.4e-25 119.4 196 39.8
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 7.5e-25 118.2 191 40.3
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.3e-24 117.5 207 38.6
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.7e-24 117.1 201 39.8
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.2e-24 116.7 191 39.8
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 2.2e-24 116.7 194 40.2
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 2.2e-24 116.7 194 40.2
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 3.7e-24 115.9 212 37.7
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 4.9e-24 115.5 198 39.9
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 6.4e-24 115.2 191 39.8
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 8.3e-24 114.8 205 38.5
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 1.1e-23 114.4 215 36.7
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.1e-23 114.4 195 40.5
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.1e-23 114.4 184 43.5
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.4e-23 114.0 192 41.7
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.4e-23 113.2 230 37.8
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 2.4e-23 113.2 199 38.7
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 2.4e-23 113.2 212 37.7
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 3.2e-23 112.8 205 38.0
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 9.2e-23 111.3 209 37.3
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 1.2e-22 110.9 205 37.1
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 1.6e-22 110.5 193 40.4
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 3.5e-22 109.4 192 38.5
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 4.6e-22 109.0 223 37.2
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 6.0e-22 108.6 215 35.3
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 7.8e-22 108.2 211 37.0
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 7.8e-22 108.2 209 37.3
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.7e-21 107.1 206 36.4
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 1.7e-21 107.1 217 37.3
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 1.7e-21 107.1 205 36.1
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 2.3e-21 106.7 192 39.6
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 3.0e-21 106.3 225 36.4
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 3.9e-21 105.9 113 54.9
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 5.1e-21 105.5 262 32.1
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 6.6e-21 105.1 214 33.6
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 6.6e-21 105.1 226 33.2
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 8.6e-21 104.8 198 35.4
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.5e-20 104.0 114 54.4
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 1.9e-20 103.6 204 36.8
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 1.9e-20 103.6 204 36.3
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 3.3e-20 102.8 218 34.9
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 4.3e-20 102.4 190 37.4
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 2.8e-19 99.8 191 35.6
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 4.7e-19 99.0 200 35.0
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 8.1e-19 98.2 203 33.0
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 1.1e-18 97.8 194 37.1
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.1e-18 97.8 193 35.8
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 1.8e-18 97.1 196 37.8
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.8e-18 97.1 175 38.9
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 2.3e-18 96.7 194 36.6
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.2e-17 94.4 119 50.4
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.2e-17 94.4 196 35.7
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 3.4e-17 92.8 194 35.6
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 5.8e-17 92.0 191 35.6
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.3e-16 90.9 125 46.4
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 1.7e-16 90.5 190 34.2
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.7e-16 90.5 202 32.7
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 2.9e-16 89.7 192 34.4
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 3.8e-16 89.4 199 32.7
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 1.1e-15 87.8 208 34.6
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.2e-14 84.3 144 38.2
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 2.1e-14 83.6 125 40.0
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 2.1e-14 83.6 194 34.0
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 6.0e-14 82.0 132 41.7
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 5.6e-12 75.5 198 32.8
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 1.1e-10 71.2 180 31.1
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 2.6e-09 66.6 53 66.0
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 4.4e-09 65.9 200 28.0
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 2.2e-08 63.5 104 41.3
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 4.9e-08 62.4 168 27.4
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 9.3e-07 58.2 112 34.8


User provided reference genes

Program Settings