Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 6.6e-193 677.2 334 100.0
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 7.3e-192 673.7 334 99.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 4.4e-189 664.5 334 97.9
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 8.1e-175 617.1 334 89.2
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 9.2e-171 603.6 334 89.2
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.2e-167 593.2 332 87.7
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 6.0e-162 574.3 332 84.6
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.7e-132 476.5 323 70.0
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 4.2e-131 471.9 320 70.9
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 9.3e-131 470.7 315 71.1
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 9.3e-131 470.7 324 71.3
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.2e-130 470.3 325 70.5
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.6e-130 469.9 319 70.2
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.6e-130 469.9 315 71.1
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 4.6e-130 468.4 314 72.9
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 6.1e-130 468.0 319 69.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 7.9e-130 467.6 314 71.7
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 7.9e-130 467.6 314 71.7
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.8e-129 466.5 316 70.9
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 3.0e-129 465.7 319 69.9
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.9e-128 463.0 318 71.4
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 2.5e-128 462.6 324 69.4
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.7e-128 461.5 314 70.7
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 5.7e-128 461.5 314 69.7
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.4e-128 461.1 324 68.2
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 7.4e-128 461.1 314 70.4
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.8e-127 459.1 310 70.6
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 4.8e-127 458.4 315 70.2
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 8.2e-127 457.6 325 68.6
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.4e-126 456.8 325 68.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.8e-126 456.4 317 69.1
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.2e-125 453.8 320 68.8
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 3.4e-125 452.2 309 70.2
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 5.9e-125 451.4 325 67.1
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.3e-124 450.3 321 67.0
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 5.0e-124 448.4 322 68.6
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 8.5e-124 447.6 311 70.1
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.4e-123 446.8 318 67.0
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 4.2e-123 445.3 310 69.0
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 9.4e-123 444.1 334 65.6
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 9.4e-123 444.1 309 67.6
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.2e-122 443.7 318 66.7
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.6e-122 443.4 318 66.4
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.1e-122 443.0 318 66.7
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.1e-122 443.0 321 68.5
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.1e-122 443.0 318 66.4
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.1e-122 443.0 323 66.6
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.0e-121 440.7 318 66.0
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.3e-121 439.5 322 67.1
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 3.0e-121 439.1 323 65.3
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.0e-120 436.4 321 65.7
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 2.5e-120 436.0 326 63.5
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 3.3e-120 435.6 328 64.9
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 7.4e-120 434.5 309 67.0
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 9.7e-120 434.1 319 65.8
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 9.7e-120 434.1 319 65.8
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 9.7e-120 434.1 319 65.8
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 9.7e-120 434.1 318 66.0
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.3e-119 433.7 321 66.0
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 2.2e-119 433.0 309 66.3
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 3.7e-119 432.2 346 63.3
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.1e-118 430.6 323 64.4
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.4e-118 429.5 330 62.1
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 9.1e-118 427.6 316 63.3
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.2e-117 427.2 321 64.5
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.2e-117 427.2 314 65.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.0e-116 424.1 288 69.1
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.9e-116 422.5 345 60.9
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 3.8e-116 422.2 318 65.4
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.9e-115 419.9 323 64.1
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 4.2e-115 418.7 317 64.7
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 2.1e-114 416.4 310 61.9
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.0e-113 414.1 334 59.6
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 3.0e-113 412.5 318 61.6
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 6.7e-113 411.4 272 72.4
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 7.4e-112 407.9 319 59.9
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 7.4e-112 407.9 290 67.9
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.2e-111 406.4 268 73.5
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.8e-111 406.0 314 63.4
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 4.8e-111 405.2 345 59.4
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 5.9e-109 398.3 318 63.5
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.6e-106 390.2 281 67.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 5.2e-105 385.2 321 59.8
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 4.4e-104 382.1 329 59.3
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 8.0e-98 361.3 250 69.6
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.0e-96 356.7 254 68.5
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.3e-95 354.0 234 73.9
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 8.3e-95 351.3 322 59.0
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 2.5e-91 339.7 317 52.7
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 9.4e-91 337.8 314 54.8
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.6e-90 337.0 310 54.2
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 8.8e-89 331.3 325 53.2
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 2.8e-87 326.2 315 52.4
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 3.7e-87 325.9 308 53.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 8.6e-84 314.7 318 48.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 8.6e-84 314.7 318 48.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-83 313.5 316 48.1
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-78 295.8 308 47.7
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 7.0e-78 295.0 222 62.2
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 2.7e-77 293.1 257 54.1
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.0e-76 291.2 317 45.4
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 8.6e-76 288.1 323 45.5
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-75 287.3 307 46.6
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.1e-74 283.5 316 44.6
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.7e-71 272.7 326 42.0
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 4.6e-69 265.8 324 45.7
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 8.9e-65 251.5 312 45.2
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 6.8e-57 225.3 213 53.5
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 9.6e-35 151.8 160 51.2
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 6.7e-28 129.0 110 57.3
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.9e-23 113.6 119 51.3
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 5.0e-07 59.7 40 65.0


User provided reference genes

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