Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g039180 Solanum pennellii HOM05D005672 ORTHO05D003038 2.5e-52 208.8 124 100.0
Solyc03g120290.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 6.3e-48 194.1 124 95.2
CAN.G438.58 Capsicum annuum HOM05D005672 ORTHO05D003038 1.2e-43 179.9 124 85.5
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 7.2e-36 154.1 124 62.1
PGSC0003DMG400002652 Solanum tuberosum HOM05D005672 ORTHO05D003038 4.7e-35 151.4 104 94.2
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 1.8e-26 122.9 132 52.3
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 3.3e-25 118.6 128 52.3
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 4.4e-25 118.2 124 50.8
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 7.5e-25 117.5 133 49.6
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 7.5e-25 117.5 124 50.8
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 2.2e-24 115.9 124 50.0
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 1.3e-21 106.7 123 47.2
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 1.7e-21 106.3 123 50.4
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 8.0e-19 97.4 120 42.5
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 5.2e-18 94.7 124 42.7
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.5e-17 93.2 124 41.9
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.5e-12 75.9 123 34.1
unitig_21.g20351 Utricularia gibba HOM05D005672 ORTHO05D003038 3.2e-12 75.5 120 38.3
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 9.4e-12 73.9 117 35.9
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 1.6e-11 73.2 115 34.8
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.1e-11 72.8 123 34.1
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 2.7e-11 72.4 117 35.9
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 2.7e-11 72.4 98 37.8
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 2.7e-11 72.4 121 35.5
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.6e-11 72.0 122 33.6
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 1.0e-10 70.5 123 32.5
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 3.0e-10 68.9 116 35.3
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 3.0e-10 68.9 122 36.1
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 6.8e-10 67.8 116 33.6
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 6.8e-10 67.8 129 38.8
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 8.8e-10 67.4 122 36.9
Nitab4.5_0000671g0010 Nicotiana tabacum HOM05D005672 ORTHO05D003038 8.8e-10 67.4 63 65.1
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 1.5e-09 66.6 55 52.7
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.5e-09 66.6 122 33.6
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 3.4e-09 65.5 113 36.3
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 3.4e-09 65.5 124 30.6
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 4.4e-09 65.1 123 41.5
Peaxi162Scf00207g00940 Petunia axillaris HOM05D005672 ORTHO05D003038 1.3e-08 63.5 130 36.2
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 2.2e-08 62.8 123 33.3
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 2.2e-08 62.8 120 35.8
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 2.2e-08 62.8 123 33.3
Ciclev10026803m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.8e-08 62.4 121 46.3
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 6.3e-08 61.2 124 32.3
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 6.3e-08 61.2 121 31.4
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 2.4e-07 59.3 123 32.5
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 5.4e-07 58.2 93 37.6
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 9.2e-07 57.4 123 30.9
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 2.7e-06 55.8 122 27.9
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 3.5e-06 55.5 123 29.3
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 3.5e-06 55.5 123 29.3
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 3.5e-06 55.5 125 31.2
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 4.5e-06 55.1 121 32.2
PGR031G0360 Punica granatum HOM05D005672 ORTHO05D003038 4.5e-06 55.1 120 43.3
PGR031G3744 Punica granatum HOM05D005672 ORTHO05D003038 4.5e-06 55.1 120 43.3
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 5.9e-06 54.7 47 57.4
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 5.9e-06 54.7 132 30.3
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 5.9e-06 54.7 115 37.4
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 5.9e-06 54.7 124 34.7
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 7.7e-06 54.3 112 27.7
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 7.7e-06 54.3 112 27.7
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 7.7e-06 54.3 112 27.7


User provided reference genes

Program Settings