Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 2.6e-175 618.6 318 100.0
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 2.3e-171 605.5 318 97.8
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 7.0e-168 594.0 318 95.6
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 6.5e-166 587.4 303 98.7
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.0e-139 500.4 318 79.6
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.5e-138 496.5 318 78.6
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.7e-135 485.7 284 87.7
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 9.5e-133 477.2 316 74.1
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.2e-132 476.9 317 73.5
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 8.0e-132 474.2 317 73.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.1e-131 473.8 320 74.4
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 2.3e-131 472.6 318 74.2
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 3.4e-130 468.8 325 71.7
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 5.8e-130 468.0 318 72.6
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 7.5e-130 467.6 317 71.6
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 7.5e-130 467.6 318 72.0
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 3.7e-129 465.3 318 72.3
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.9e-128 463.0 316 72.2
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 4.1e-128 461.8 303 75.6
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 9.2e-128 460.7 317 71.9
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 7.8e-127 457.6 324 69.8
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 7.8e-127 457.6 248 92.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.0e-126 457.2 316 72.8
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.3e-126 456.8 316 71.5
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.7e-126 456.4 318 71.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.0e-126 455.7 316 73.1
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 3.9e-126 455.3 318 69.8
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 5.0e-126 454.9 321 71.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.0e-126 454.9 318 72.0
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 6.6e-126 454.5 318 72.3
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 6.6e-126 454.5 317 71.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.5e-125 452.6 316 70.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 3.3e-125 452.2 319 70.5
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 4.3e-125 451.8 316 71.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 5.6e-125 451.4 318 70.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 7.3e-125 451.1 318 70.8
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.2e-124 450.3 316 69.9
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.1e-124 449.5 316 70.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.8e-124 449.1 316 69.6
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 2.8e-124 449.1 316 70.3
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 2.8e-124 449.1 316 70.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.8e-124 449.1 316 68.7
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 4.7e-124 448.4 315 68.6
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 4.7e-124 448.4 318 69.2
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 6.2e-124 448.0 315 68.6
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 6.2e-124 448.0 318 71.4
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 8.1e-124 447.6 314 69.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.3e-123 446.0 316 69.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.1e-123 445.7 315 68.3
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 4.0e-123 445.3 317 66.9
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.0e-123 445.3 316 69.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 6.8e-123 444.5 314 70.1
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.2e-122 443.7 318 70.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.2e-122 443.7 316 69.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.0e-122 443.0 315 69.2
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 3.4e-122 442.2 314 68.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 5.8e-122 441.4 322 68.6
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 9.9e-122 440.7 318 67.9
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.9e-121 439.1 306 71.6
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 3.7e-121 438.7 317 68.1
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.9e-120 436.4 303 71.0
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.1e-120 435.3 303 70.6
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.1e-119 433.0 318 68.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 6.0e-119 431.4 318 67.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 6.0e-119 431.4 320 70.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-118 429.9 304 70.4
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 8.6e-118 427.6 361 62.0
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.5e-117 426.8 318 68.2
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.9e-117 426.4 297 71.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.5e-117 426.0 303 69.0
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 2.5e-117 426.0 309 68.3
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 4.3e-117 425.2 303 69.6
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.1e-116 422.9 318 69.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 8.9e-115 417.5 317 65.0
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 2.7e-111 406.0 269 74.0
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 4.6e-111 405.2 338 62.1
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 6.0e-111 404.8 318 64.2
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.9e-109 399.8 312 66.0
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.1e-108 394.4 303 67.0
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-107 394.0 318 64.8
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 3.1e-107 392.5 318 64.8
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 3.1e-107 392.5 298 65.8
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.1e-104 384.0 209 90.0
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 8.7e-102 374.4 339 59.9
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 4.8e-100 368.6 316 59.8
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.1e-95 353.2 255 69.4
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.7e-95 352.8 270 68.9
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.7e-95 352.8 270 68.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 4.3e-93 345.5 315 58.7
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.9e-88 330.1 315 50.2
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.3e-86 323.9 322 50.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 9.6e-85 317.8 255 64.3
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.5e-82 310.5 238 63.4
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.0e-78 297.7 315 45.1
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.3e-76 290.8 315 45.1
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.5e-74 283.9 319 47.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 6.5e-73 278.5 215 62.3
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 4.2e-72 275.8 194 67.5
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 3.0e-70 269.6 181 72.4
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.4e-67 260.8 308 41.9
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.9e-65 253.1 268 48.9
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 2.1e-63 246.9 332 45.5
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.3e-62 243.4 238 52.5
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 7.7e-58 228.4 339 38.3
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 9.7e-53 211.5 147 68.7
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 6.3e-44 182.2 142 63.4
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 4.5e-42 176.0 129 66.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.7e-41 174.1 228 45.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-31 141.0 103 67.0
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 3.4e-29 133.3 247 35.6
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 1.0e-25 121.7 70 88.6
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 4.3e-24 116.3 88 65.9
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.6e-23 113.2 93 61.3
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 8.3e-20 102.1 179 34.6
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.7e-09 67.8 72 48.6
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 7.3e-08 62.4 43 69.8
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.8e-06 57.8 44 63.6
Actinidia18673 Actinidia chinensis HOM05D003194 ORTHO05D003790 3.1e-06 57.0 306 23.2
Migut.F00173 Erythranthe guttata HOM05D003194 ORTHO05D003790 4.0e-06 56.6 273 23.1


User provided reference genes

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