Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.7e-62 242.7 134 100.0
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 4.8e-62 241.1 134 99.3
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.4e-61 238.8 134 97.8
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.3e-56 222.2 134 91.8
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-55 219.9 134 91.0
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.8e-54 215.3 134 88.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.0e-51 206.8 133 85.7
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.9e-43 178.7 141 74.5
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.1e-41 172.6 141 71.6
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.1e-37 160.2 134 66.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 7.0e-37 157.5 133 69.9
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.7e-36 155.6 134 64.2
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.6e-36 154.8 134 64.9
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 3.3e-34 148.7 121 70.2
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.8e-32 142.9 134 60.4
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.8e-32 141.0 138 61.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.8e-32 141.0 138 61.6
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 8.9e-32 140.6 129 62.8
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.2e-31 140.2 124 65.3
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.0e-31 139.4 127 63.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 5.8e-31 137.9 129 62.8
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 5.8e-31 137.9 133 60.2
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 9.8e-31 137.1 130 58.5
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.7e-30 136.3 134 61.2
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.7e-30 136.3 134 60.4
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 2.9e-30 135.6 130 59.2
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 4.9e-30 134.8 104 71.2
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 4.9e-30 134.8 128 64.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 8.3e-30 134.0 129 61.2
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.3e-30 134.0 113 66.4
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.1e-29 133.7 120 64.2
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 1.1e-29 133.7 120 64.2
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.1e-29 133.7 135 56.3
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.4e-29 133.3 128 62.5
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.9e-29 132.9 125 59.2
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-29 132.9 138 58.7
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.9e-29 132.9 124 57.3
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.2e-28 130.2 124 57.3
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 2.0e-28 129.4 126 58.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.7e-28 129.0 119 62.2
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.7e-28 129.0 124 56.5
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 3.5e-28 128.6 135 55.6
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 4.6e-28 128.3 121 59.5
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.0e-28 127.9 134 56.0
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.0e-27 127.1 121 61.2
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-27 125.9 121 58.7
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 2.3e-27 125.9 120 61.7
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 2.3e-27 125.9 110 65.5
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.3e-27 125.9 126 56.3
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 3.9e-27 125.2 120 60.8
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 3.9e-27 125.2 134 56.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 5.0e-27 124.8 126 58.7
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 5.0e-27 124.8 121 57.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.6e-27 124.4 125 56.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 6.6e-27 124.4 119 58.0
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.1e-26 123.6 119 60.5
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-26 123.6 121 58.7
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-26 123.6 121 58.7
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.5e-26 123.2 135 55.6
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.5e-26 123.2 124 59.7
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.5e-26 123.2 118 61.0
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.9e-26 122.9 121 60.3
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.9e-26 122.9 124 53.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.5e-26 122.5 120 60.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-26 122.1 120 56.7
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-26 122.1 120 56.7
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.3e-26 122.1 120 56.7
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 3.3e-26 122.1 95 67.4
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.3e-26 122.1 119 58.0
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 3.3e-26 122.1 135 52.6
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 5.6e-26 121.3 124 54.8
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 7.3e-26 120.9 126 54.8
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 7.3e-26 120.9 134 53.7
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 9.5e-26 120.6 120 56.7
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 9.5e-26 120.6 120 56.7
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 9.5e-26 120.6 134 56.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.2e-25 120.2 129 55.8
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.6e-25 119.8 121 57.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.6e-25 119.8 121 57.0
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.1e-25 119.4 132 53.0
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 2.1e-25 119.4 128 53.9
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.8e-25 119.0 103 62.1
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 3.6e-25 118.6 120 59.2
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.6e-25 118.6 130 54.6
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.7e-25 118.2 101 66.3
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 4.7e-25 118.2 109 62.4
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 8.1e-25 117.5 121 53.7
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.4e-24 116.7 128 56.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 1.8e-24 116.3 144 51.4
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.3e-24 115.9 129 55.0
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.1e-24 115.5 118 55.9
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 5.2e-24 114.8 132 51.5
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 8.9e-24 114.0 142 52.1
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 8.9e-24 114.0 123 53.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.5e-23 113.2 123 52.8
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.0e-23 112.8 107 57.9
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.6e-23 112.5 124 53.2
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.2e-22 109.4 119 53.8
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.9e-22 108.2 124 50.0
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 6.4e-22 107.8 134 47.0
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.9e-21 106.3 129 49.6
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.2e-20 103.6 124 51.6
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 2.1e-20 102.8 125 50.4
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.5e-20 102.1 96 57.3
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.0e-19 100.5 112 50.9
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.3e-19 100.1 130 46.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 3.9e-19 98.6 124 50.0
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.1e-19 98.2 130 45.4
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 8.6e-19 97.4 86 57.0
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 9.5e-18 94.0 105 50.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.2e-17 93.6 73 68.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.2e-17 93.6 89 60.7
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 3.6e-17 92.0 100 56.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.8e-16 89.7 64 73.4
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.9e-16 87.4 64 73.4
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.5e-15 86.7 113 45.1
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-13 79.7 99 45.5
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.2e-13 79.0 118 45.8
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 4.6e-12 75.1 86 47.7
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.3e-11 73.6 86 46.5
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.9e-11 72.0 83 48.2
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 3.9e-11 72.0 110 40.0
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 3.1e-08 62.4 117 36.8
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.5e-07 60.1 96 38.5


User provided reference genes

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