Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g036740 Solanum pennellii HOM05D001966 ORTHO05D010127 7.2e-68 260.4 125 100.0
Nitab4.5_0018109g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.5e-09 66.6 36 83.3
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.4e-09 65.5 36 80.6
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 3.4e-09 65.5 36 80.6
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 4.4e-09 65.1 36 80.6
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.4e-09 65.1 37 75.7
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 5.8e-09 64.7 35 82.9
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 5.8e-09 64.7 37 78.4
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 7.5e-09 64.3 36 80.6
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 7.5e-09 64.3 37 78.4
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 7.5e-09 64.3 36 80.6
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.3e-08 63.5 57 56.1
Nn6g32819 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.2e-08 62.8 36 77.8
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 2.9e-08 62.4 34 82.4
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 3.7e-08 62.0 36 80.6
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.7e-08 62.0 36 80.6
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.7e-08 62.0 36 80.6
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.7e-08 62.0 36 80.6
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.7e-08 62.0 36 80.6
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 3.7e-08 62.0 36 77.8
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 4.9e-08 61.6 35 80.0
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 8.3e-08 60.8 35 80.0
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 8.3e-08 60.8 35 80.0
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 8.3e-08 60.8 35 80.0
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 8.3e-08 60.8 38 76.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.1e-07 60.5 33 81.8
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.4e-07 60.1 37 75.7
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.4e-07 59.3 36 75.0
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 4.1e-07 58.5 34 79.4
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 4.1e-07 58.5 49 61.2
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.6e-06 56.6 33 78.8
Nn1g00555 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.5e-06 55.5 36 69.4


User provided reference genes

Program Settings