Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g036440 Solanum pennellii HOM05D000121 ORTHO05D018186 1.3e-73 279.6 146 100.0
Solyc03g117540.4 Solanum lycopersicum HOM05D000121 ORTHO05D007423 5.6e-72 274.2 145 97.9
Peaxi162Scf00553g00540 Petunia axillaris HOM05D000121 ORTHO05D007423 5.3e-54 214.5 143 77.6
CAN.G407.8 Capsicum annuum HOM05D000121 ORTHO05D007423 1.7e-31 139.8 90 80.0
Nitab4.5_0010868g0020 Nicotiana tabacum HOM05D000121 ORTHO05D007423 1.1e-30 137.1 104 73.1
TAR625G0397 Trochodendron aralioides HOM05D000121 ORTHO05D007423 5.1e-25 118.2 128 44.5
Actinidia00678 Actinidia chinensis HOM05D000121 ORTHO05D007423 1.3e-23 113.6 126 43.7
Nn8g39907 Nelumbo nucifera HOM05D000121 ORTHO05D007423 1.8e-22 109.8 128 42.2
Rhsim08G0205400 Rhododendron simsii HOM05D000121 ORTHO05D007423 1.8e-22 109.8 126 42.1
Cc04_g05140 Coffea canephora HOM05D000121 ORTHO05D007423 4.1e-22 108.6 124 42.7
Duzib235G1084 Durio zibethinus HOM05D000121 ORTHO05D007423 1.5e-21 106.7 125 40.8
vmacro19059 Vaccinium macrocarpon HOM05D000121 ORTHO05D007423 7.7e-21 104.4 172 38.4
Atru.chr10.2415_Atru.chr10.2416 Acer truncatum HOM05D000121 ORTHO05D007423 2.2e-20 102.8 125 36.0
Manes.11G066800 Manihot esculenta HOM05D000121 ORTHO05D007423 2.9e-20 102.4 125 38.4
CANSAT56G2614 Cannabis sativa HOM05D000121 ORTHO05D007423 3.8e-20 102.1 128 39.8
Dinv21413 Davidia involucrata HOM05D000121 ORTHO05D007423 3.8e-20 102.1 116 44.0
Cfa001878 Carpinus fangiana HOM05D000121 ORTHO05D007423 1.1e-19 100.5 125 40.0
Thecc.06G042000 Theobroma cacao HOM05D000121 ORTHO05D007423 1.1e-19 100.5 125 40.8
SalBow7G3127 Salvia bowleyana HOM05D000121 ORTHO05D007423 1.9e-19 99.8 129 42.6
Gohir.D05G119900 Gossypium hirsutum HOM05D000121 ORTHO05D007423 7.2e-19 97.8 125 36.8
Gorai.009G123500 Gossypium raimondii HOM05D000121 ORTHO05D007423 9.4e-19 97.4 125 36.8
Potri.003G182601 Populus trichocarpa HOM05D000121 ORTHO05D007423 2.7e-18 95.9 125 37.6
Prupe.3G098500 Prunus persica HOM05D000121 ORTHO05D007423 3.6e-18 95.5 126 39.7
Lj9C493G4 Lonicera japonica HOM05D000121 ORTHO05D007423 4.7e-18 95.1 98 50.0
PGR102G2529 Punica granatum HOM05D000121 ORTHO05D007423 1.4e-17 93.6 129 36.4
Psat5g098320 Pisum sativum HOM05D000121 ORTHO05D007423 3.9e-17 92.0 132 34.8
FvH4_6g28590 Fragaria vesca HOM05D000121 ORTHO05D007423 1.5e-16 90.1 125 35.2
Migut.I00690 Erythranthe guttata HOM05D000121 ORTHO05D018186 1.7e-15 86.7 117 39.3
CiPaw.01G254800 Carya illinoinensis HOM05D000121 ORTHO05D007423 2.2e-15 86.3 125 34.4
TWI18G1091 Tripterygium wilfordii HOM05D000121 ORTHO05D007423 2.8e-15 85.9 129 37.2
MBI15_g18248_MAGBIO Magnolia biondii HOM05D000121 ORTHO05D018186 3.7e-15 85.5 121 35.5
SGA_v2.0_scaffold37G14700 Striga asiatica HOM05D000121 ORTHO05D007423 6.3e-15 84.7 125 37.6
PSO384G0944 Papaver somniferum HOM05D000121 ORTHO05D007423 1.1e-14 84.0 128 35.9
Medtr2g105190 Medicago truncatula HOM05D000121 ORTHO05D007423 1.4e-14 83.6 137 32.1
RcHm_v2.0_Chr2g0132931 Rosa chinensis HOM05D000121 ORTHO05D007423 2.4e-14 82.8 122 35.2
ECA247G2933 Erigeron canadensis HOM05D000121 ORTHO05D007423 7.0e-14 81.3 118 35.6
FAN14G1613 Fragaria x ananassa HOM05D000121 ORTHO05D007423 1.6e-13 80.1 117 33.3
Sc12g0008290 Simmondsia chinensis HOM05D000121 ORTHO05D007423 1.6e-13 80.1 126 31.7
Lj3g0008200 Lotus japonicus HOM05D000121 ORTHO05D007423 2.0e-13 79.7 129 34.1
CSS0006592 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D018186 1.3e-12 77.0 105 42.9
Glyma.13G370300 Glycine max HOM05D000121 ORTHO05D007423 1.3e-12 77.0 129 32.6
MSTRG.11184 Avicennia marina HOM05D000121 ORTHO05D007423 1.7e-12 76.6 92 38.0
HanXRQChr04g0099601 Helianthus annuus HOM05D000121 ORTHO05D007423 1.7e-12 76.6 97 41.2
Aqoxy7G02252 Aquilegia oxysepala HOM05D000121 ORTHO05D007423 6.5e-12 74.7 136 30.1
ClCG10G012900 Citrullus lanatus HOM05D000121 ORTHO05D007423 6.5e-12 74.7 110 35.5
Phvul.005G175600 Phaseolus vulgaris HOM05D000121 ORTHO05D007423 3.2e-11 72.4 131 35.1
MELO3C026737.2 Cucumis melo HOM05D000121 ORTHO05D007423 4.2e-11 72.0 127 33.9
FAN05G1320 Fragaria x ananassa HOM05D000121 ORTHO05D007423 9.4e-11 70.9 100 36.0
BraA03t14190Z Brassica rapa HOM05D000121 ORTHO05D007423 1.6e-10 70.1 133 36.1
MD09G1225000 Malus domestica HOM05D000121 ORTHO05D007423 1.6e-10 70.1 105 34.3
Sed0004285 Sechium edule HOM05D000121 ORTHO05D007423 2.7e-10 69.3 123 30.9
CARHR104100 Cardamine hirsuta HOM05D000121 ORTHO05D018186 4.7e-10 68.6 121 32.2
Zm00001eb374580 Zea mays HOM05D000121 ORTHO05D007423 4.7e-10 68.6 128 31.2
CsaV3_3G032770 Cucumis sativus L. HOM05D000121 ORTHO05D007423 8.0e-10 67.8 127 31.5
ATR0739G176 Amborella trichopoda HOM05D000121 ORTHO05D007423 1.0e-09 67.4 85 37.6
Lalb_Chr22g0349431 Lupinus albus HOM05D000121 ORTHO05D007423 2.3e-09 66.2 93 35.5
TPR.G19154 Trifolium pratense HOM05D000121 ORTHO05D007423 2.3e-09 66.2 89 36.0
HPP92_015868 Vanilla planifolia HOM05D000121 ORTHO05D007423 3.0e-09 65.9 70 42.9
Gohir.A05G119000 Gossypium hirsutum HOM05D000121 ORTHO05D007423 4.0e-09 65.5 60 46.7
A03p51040 Brassica napus HOM05D000121 ORTHO05D007423 1.2e-08 63.9 138 33.3
Sp7g16030 Schrenkiella parvula HOM05D000121 ORTHO05D007423 2.0e-08 63.2 122 32.0
BolC7t45452H Brassica oleracea HOM05D000121 ORTHO05D007423 2.6e-08 62.8 142 34.5
C07p49470 Brassica napus HOM05D000121 ORTHO05D007423 3.3e-08 62.4 137 32.8
AL3G44200 Arabidopsis lyrata HOM05D000121 ORTHO05D007423 4.4e-08 62.0 122 29.5
AT2G07680 Arabidopsis thaliana HOM05D000121 ORTHO05D007423 5.7e-08 61.6 147 32.0
EL10Ac9g22203 Beta vulgaris HOM05D000121 ORTHO05D007423 5.7e-08 61.6 89 37.1
arahy.Tifrunner.gnm1.ann1.AY4NJ9 Arachis hypogaea HOM05D000121 ORTHO05D007423 7.5e-08 61.2 88 33.0
Carub.0013s0012 Capsella rubella HOM05D000121 ORTHO05D018186 9.7e-08 60.8 125 31.2
Os06g0184700 Oryza sativa ssp. japonica HOM05D000121 ORTHO05D007423 9.7e-08 60.8 82 42.7
Thhalv10024220m.g Eutrema salsugineum HOM05D000121 ORTHO05D007423 4.8e-07 58.5 141 31.2
VMungo1080G0885 Vigna mungo HOM05D000121 ORTHO05D007423 4.8e-07 58.5 85 35.3
VMungo0647G2187 Vigna mungo HOM05D003335 ORTHO05D003853 1.4e-06 57.0 85 36.5
Sabra03G0133400 Salix brachista HOM05D000121 ORTHO05D007423 7.0e-06 54.7 52 48.1


User provided reference genes

Program Settings