Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 3.9e-70 268.1 141 100.0
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 4.6e-63 244.6 141 92.2
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 3.0e-62 241.9 141 90.8
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 4.9e-49 198.0 137 78.1
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.2e-47 193.4 139 77.0
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.1e-43 180.3 139 73.4
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.6e-36 156.4 132 69.7
Nitab4.5_0006484g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 9.1e-27 124.0 106 66.0
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 3.9e-22 108.6 92 59.8
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 4.4e-21 105.1 94 57.4
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 1.7e-20 103.2 138 46.4
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 8.2e-20 100.9 137 46.0
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.1e-19 100.5 138 45.7
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 3.1e-19 99.0 137 43.8
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 4.1e-19 98.6 141 44.0
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 4.1e-19 98.6 130 43.8
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 2.6e-18 95.9 110 50.9
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 2.6e-18 95.9 104 51.0
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 7.7e-18 94.4 137 45.3
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 2.2e-17 92.8 135 42.2
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 2.2e-17 92.8 86 53.5
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 2.9e-17 92.4 92 53.3
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 2.5e-16 89.4 104 51.0
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 2.5e-16 89.4 136 44.9
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 9.4e-16 87.4 94 51.1
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 1.6e-15 86.7 119 43.7
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 1.6e-15 86.7 116 47.4
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 2.1e-15 86.3 115 44.3
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 2.7e-15 85.9 111 46.8
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 1.0e-14 84.0 131 40.5
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 1.0e-14 84.0 113 47.8
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 1.4e-14 83.6 114 47.4
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 2.3e-14 82.8 141 44.0
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 2.3e-14 82.8 79 59.5
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 3.0e-14 82.4 103 47.6
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 3.0e-14 82.4 100 47.0
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 6.7e-14 81.3 129 39.5
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 6.7e-14 81.3 92 50.0
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 1.1e-13 80.5 85 54.1
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 1.5e-13 80.1 91 50.5
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 3.3e-13 79.0 135 41.5
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 5.7e-13 78.2 99 45.5
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 1.3e-12 77.0 58 63.8
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 1.3e-12 77.0 58 63.8
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 1.7e-12 76.6 58 63.8
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 1.7e-12 76.6 58 63.8
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 1.7e-12 76.6 58 63.8
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 1.7e-12 76.6 96 46.9
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 2.2e-12 76.3 83 50.6
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 2.2e-12 76.3 113 44.2
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 2.2e-12 76.3 65 63.1
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 2.8e-12 75.9 106 47.2
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 2.8e-12 75.9 106 47.2
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 2.8e-12 75.9 54 70.4
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 2.8e-12 75.9 97 46.4
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 3.7e-12 75.5 106 44.3
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 3.7e-12 75.5 61 59.0
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 3.7e-12 75.5 139 40.3
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 4.8e-12 75.1 55 69.1
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 4.8e-12 75.1 61 60.7
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 6.3e-12 74.7 106 42.5
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 8.2e-12 74.3 116 45.7
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 1.4e-11 73.6 61 60.7
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 1.8e-11 73.2 134 43.3
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 2.4e-11 72.8 61 62.3
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 3.1e-11 72.4 62 58.1
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 3.1e-11 72.4 62 58.1
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 7.0e-11 71.2 63 55.6
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 7.0e-11 71.2 111 40.5
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 9.1e-11 70.9 58 60.3
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 9.1e-11 70.9 86 45.3
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 9.1e-11 70.9 64 56.2
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.2e-10 70.5 62 56.5
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.2e-10 70.5 136 35.3
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.6e-10 70.1 62 58.1
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 1.6e-10 70.1 111 40.5
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 1.6e-10 70.1 92 43.5
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 2.0e-10 69.7 80 48.8
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.6e-10 69.3 58 62.1
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 3.5e-10 68.9 91 42.9
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 3.5e-10 68.9 64 53.1
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 3.5e-10 68.9 59 59.3
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 3.5e-10 68.9 61 57.4
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 4.5e-10 68.6 61 57.4
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 5.9e-10 68.2 90 45.6
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 1.3e-09 67.0 62 53.2
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 1.3e-09 67.0 58 62.1
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 3.8e-09 65.5 46 65.2
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 5.0e-09 65.1 102 38.2
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 8.5e-09 64.3 81 43.2
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 1.5e-08 63.5 64 48.4
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 1.9e-08 63.2 61 54.1
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 3.2e-08 62.4 79 46.8
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 4.2e-08 62.0 54 57.4
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 7.2e-08 61.2 77 42.9
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 3.6e-07 58.9 52 55.8
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 3.0e-06 55.8 46 63.0


User provided reference genes

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