Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g034890 Solanum pennellii HOM05D001837 ORTHO05D003156 2.1e-117 425.6 207 100.0
Peaxi162Scf00274g00457 Petunia axillaris HOM05D001837 ORTHO05D003156 1.2e-59 233.8 203 61.6
CSS0026210 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 7.8e-27 124.8 221 35.7
CSS0045077 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 7.8e-27 124.8 221 35.7
Nitab4.5_0001128g0050 Nicotiana tabacum HOM05D001837 ORTHO05D003156 1.9e-25 120.2 152 48.7
GSVIVG01007989001 Vitis vinifera HOM05D001837 ORTHO05D003156 2.8e-24 116.3 228 33.3
AUR62021664 Chenopodium quinoa HOM05D001837 ORTHO05D003156 1.8e-23 113.6 221 33.0
AUR62008429 Chenopodium quinoa HOM05D001837 ORTHO05D003156 8.9e-23 111.3 221 32.6
Hma1.2p1_1619F.1_g293930 Hydrangea macrophylla HOM05D001837 ORTHO05D003156 1.5e-22 110.5 203 33.5
Ciclev10020575m.g Citrus clementina HOM05D001837 ORTHO05D003156 1.3e-21 107.5 221 33.9
TAR374G0034 Trochodendron aralioides HOM05D001837 ORTHO05D003156 2.9e-21 106.3 225 32.4
Actinidia37619 Actinidia chinensis HOM05D001837 ORTHO05D003156 5.4e-20 102.1 221 30.3
Duzib068G1234 Durio zibethinus HOM05D001837 ORTHO05D003156 5.4e-20 102.1 227 31.7
Sc12g0006430 Simmondsia chinensis HOM05D001837 ORTHO05D003156 9.2e-20 101.3 227 31.3
Hund02639 Selenicereus undatus HOM05D001837 ORTHO05D003156 6.0e-19 98.6 222 29.7
CSS0046922 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 7.8e-19 98.2 203 33.0
Rhsim12G0155800 Rhododendron simsii HOM05D001837 ORTHO05D003156 1.0e-18 97.8 202 35.1
vmacro16543 Vaccinium macrocarpon HOM05D001837 ORTHO05D003156 2.3e-18 96.7 199 35.2
EL10Ac5g11033 Beta vulgaris HOM05D001837 ORTHO05D003156 3.0e-18 96.3 219 32.0
Manes.05G103601 Manihot esculenta HOM05D001837 ORTHO05D003156 3.9e-18 95.9 219 30.1
Nn4g23208 Nelumbo nucifera HOM05D001837 ORTHO05D003156 6.6e-18 95.1 225 32.0
Prupe.1G276600 Prunus persica HOM05D001837 ORTHO05D003156 6.6e-18 95.1 219 32.0
Haze_11995 Corylus avellana HOM05D001837 ORTHO05D003156 1.1e-17 94.4 219 33.3
Actinidia04882 Actinidia chinensis HOM05D001837 ORTHO05D003156 1.5e-17 94.0 207 33.3
Thecc.03G090700 Theobroma cacao HOM05D001837 ORTHO05D003156 2.5e-17 93.2 227 29.5
Oeu002089.1 Olea europaea HOM05D001837 ORTHO05D003156 3.3e-17 92.8 188 32.4
Nn4g23210 Nelumbo nucifera HOM05D001837 ORTHO05D003156 4.3e-17 92.4 220 31.8
Cfa018926 Carpinus fangiana HOM05D001837 ORTHO05D003156 5.6e-17 92.0 193 32.1
Nn3g17279 Nelumbo nucifera HOM05D001837 ORTHO05D003156 5.6e-17 92.0 206 33.0
QL03p068624 Quercus lobata HOM05D001837 ORTHO05D003156 7.3e-17 91.7 219 31.1
Manes.06G091500 Manihot esculenta HOM05D001837 ORTHO05D003156 1.2e-16 90.9 230 30.0
QL05p030086 Quercus lobata HOM05D001837 ORTHO05D003156 1.2e-16 90.9 220 30.9
Manes.14G079700 Manihot esculenta HOM05D001837 ORTHO05D003156 1.6e-16 90.5 222 28.8
Duzib205G1152 Durio zibethinus HOM05D001837 ORTHO05D003156 1.1e-15 87.8 203 29.1
Migut.I00190 Erythranthe guttata HOM05D001837 ORTHO05D003156 1.1e-15 87.8 234 29.1
Dinv16662 Davidia involucrata HOM05D001837 ORTHO05D003156 1.8e-15 87.0 220 29.5
TAR622G0453 Trochodendron aralioides HOM05D001837 ORTHO05D003156 1.8e-15 87.0 226 31.9
Sabra10G0127100 Salix brachista HOM05D001837 ORTHO05D003156 2.4e-15 86.7 228 28.5
CANSAT64G2867 Cannabis sativa HOM05D001837 ORTHO05D003156 3.1e-15 86.3 221 29.9
MD16G1070700 Malus domestica HOM05D001837 ORTHO05D003156 3.1e-15 86.3 219 29.7
Atru.chr11.1764 Acer truncatum HOM05D001837 ORTHO05D003156 5.2e-15 85.5 215 29.3
Cpa.g.sc1.45 Carica papaya HOM05D001837 ORTHO05D003156 6.8e-15 85.1 180 30.6
Potri.010G167300 Populus trichocarpa HOM05D001837 ORTHO05D003156 6.8e-15 85.1 225 28.4
Haze_07310 Corylus avellana HOM05D001837 ORTHO05D003156 8.9e-15 84.7 191 29.8
RcHm_v2.0_Chr4g0439551 Rosa chinensis HOM05D001837 ORTHO05D003156 8.9e-15 84.7 221 31.2
Gohir.A07G065800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 1.2e-14 84.3 222 28.4
FvH4_4g31160 Fragaria vesca HOM05D001837 ORTHO05D003156 1.5e-14 84.0 219 28.3
HanXRQChr05g0156101 Helianthus annuus HOM05D001837 ORTHO05D003156 2.0e-14 83.6 232 28.9
MBI05_g10771_MAGBIO Magnolia biondii HOM05D001837 ORTHO05D003156 2.0e-14 83.6 214 29.4
MD13G1070300 Malus domestica HOM05D001837 ORTHO05D003156 2.6e-14 83.2 219 29.2
Ciclev10031963m.g Citrus clementina HOM05D001837 ORTHO05D003156 3.4e-14 82.8 219 30.6
Gohir.D07G070300 Gossypium hirsutum HOM05D001837 ORTHO05D003156 3.4e-14 82.8 226 27.9
Gorai.001G074200 Gossypium raimondii HOM05D001837 ORTHO05D003156 3.4e-14 82.8 226 27.9
TWI75G0812 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 3.4e-14 82.8 219 30.1
TWI31G0386 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 9.9e-14 81.3 221 29.4
Manes.01G034600 Manihot esculenta HOM05D001837 ORTHO05D003156 1.3e-13 80.9 219 28.8
Dinv38727 Davidia involucrata HOM05D001837 ORTHO05D003156 1.7e-13 80.5 231 28.1
FAN17G3096 Fragaria x ananassa HOM05D001837 ORTHO05D003156 1.7e-13 80.5 219 27.9
FAN07G1123 Fragaria x ananassa HOM05D001837 ORTHO05D003156 2.9e-13 79.7 221 26.7
PGR083G0186 Punica granatum HOM05D001837 ORTHO05D003156 2.9e-13 79.7 196 28.1
FAN22G1026 Fragaria x ananassa HOM05D001837 ORTHO05D003156 3.8e-13 79.3 235 26.0
Aqoxy3G03432 Aquilegia oxysepala HOM05D001837 ORTHO05D003156 6.4e-13 78.6 228 29.8
SalBow5G0823 Salvia bowleyana HOM05D001837 ORTHO05D003156 6.4e-13 78.6 210 29.0
Potri.008G088200 Populus trichocarpa HOM05D001837 ORTHO05D003156 8.4e-13 78.2 220 26.4
DCAR_016567 Daucus carota HOM05D001837 ORTHO05D003156 1.9e-12 77.0 230 25.7
CiPaw.06G086700 Carya illinoinensis HOM05D001837 ORTHO05D003156 3.2e-12 76.3 163 31.3
ECA246G5049 Erigeron canadensis HOM05D001837 ORTHO05D003156 4.2e-12 75.9 224 27.7
Thecc.02G343900 Theobroma cacao HOM05D001837 ORTHO05D003156 7.1e-12 75.1 224 29.0
Eucgr.B00522 Eucalyptus grandis HOM05D001837 ORTHO05D003156 1.2e-11 74.3 188 27.7
CiPaw.05G133000 Carya illinoinensis HOM05D001837 ORTHO05D003156 2.1e-11 73.6 220 27.3
Lsat_1_v5_gn_9_27060 Lactuca sativa HOM05D001837 ORTHO05D003156 2.1e-11 73.6 201 28.4
Sabra08G0065900 Salix brachista HOM05D001837 ORTHO05D003156 2.7e-11 73.2 220 27.3
COL.COLO4_22947 Corchorus olitorius HOM05D001837 ORTHO05D003156 3.5e-11 72.8 183 29.5
RcHm_v2.0_Chr7g0181601 Rosa chinensis HOM05D001837 ORTHO05D003156 4.6e-11 72.4 237 27.4
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.0e-11 72.0 206 28.2
QL10p017299 Quercus lobata HOM05D001837 ORTHO05D003156 7.8e-11 71.6 190 31.1
CANSAT80G2286 Cannabis sativa HOM05D001837 ORTHO05D003156 1.3e-10 70.9 208 27.4
Glyma.05G025700 Glycine max HOM05D001837 ORTHO05D003156 3.9e-10 69.3 208 28.4
Gorai.008G194100 Gossypium raimondii HOM05D001837 ORTHO05D003156 6.6e-10 68.6 227 25.6
PSO013G0078 Papaver somniferum HOM05D001837 ORTHO05D003156 6.6e-10 68.6 222 28.8
Duzib248G0439 Durio zibethinus HOM05D001837 ORTHO05D003156 8.7e-10 68.2 229 27.9
PGSC0003DMG400019525 Solanum tuberosum HOM05D001837 ORTHO05D003156 1.1e-09 67.8 34 88.2
VMungo0251G2482 Vigna mungo HOM05D001837 ORTHO05D003156 1.9e-09 67.0 224 28.1
FAN12G3985 Fragaria x ananassa HOM05D001837 ORTHO05D003156 2.5e-09 66.6 204 26.0
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.6e-09 65.5 237 26.6
Gorai.005G142100 Gossypium raimondii HOM05D001837 ORTHO05D003156 5.6e-09 65.5 185 27.0
SGA_v2.0_scaffold56G19998 Striga asiatica HOM05D001837 ORTHO05D003156 5.6e-09 65.5 222 26.1
Dinv34139 Davidia involucrata HOM05D001837 ORTHO05D003156 7.3e-09 65.1 225 27.1
Glyma.17G101300 Glycine max HOM05D001837 ORTHO05D003156 7.3e-09 65.1 228 27.6
Gohir.A03G101800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 7.3e-09 65.1 185 27.0
PSO832G0505 Papaver somniferum HOM05D001837 ORTHO05D003156 7.3e-09 65.1 184 28.8
CiPaw.12G012500 Carya illinoinensis HOM05D001837 ORTHO05D003156 9.6e-09 64.7 192 28.1
Gohir.D02G126600 Gossypium hirsutum HOM05D001837 ORTHO05D003156 9.6e-09 64.7 185 27.0
Duzib268G0595 Durio zibethinus HOM05D001837 ORTHO05D003156 1.2e-08 64.3 180 26.7
Gohir.D13G076000 Gossypium hirsutum HOM05D001837 ORTHO05D003156 1.6e-08 63.9 183 27.3
Gorai.013G086600 Gossypium raimondii HOM05D001837 ORTHO05D003156 1.6e-08 63.9 183 27.3
Phvul.003G189100 Phaseolus vulgaris HOM05D001837 ORTHO05D003156 1.6e-08 63.9 224 26.8
arahy.Tifrunner.gnm1.ann1.K1S2P8 Arachis hypogaea HOM05D001837 ORTHO05D003156 2.1e-08 63.5 235 26.0
MELO3C001991.2 Cucumis melo HOM05D001837 ORTHO05D003156 2.1e-08 63.5 201 25.4
CsaV3_1G005580 Cucumis sativus L. HOM05D001837 ORTHO05D003156 2.1e-08 63.5 226 25.2
arahy.Tifrunner.gnm1.ann1.U9RCFT Arachis hypogaea HOM05D001837 ORTHO05D003156 2.8e-08 63.2 214 26.2
ClCG04G012180 Citrullus lanatus HOM05D001837 ORTHO05D003156 2.8e-08 63.2 223 24.2
MD14G1201900 Malus domestica HOM05D001837 ORTHO05D003156 2.8e-08 63.2 225 25.8
FvH4_5g14780 Fragaria vesca HOM05D001837 ORTHO05D003156 3.6e-08 62.8 239 25.5
ClCG05G024160 Citrullus lanatus HOM05D001837 ORTHO05D003156 4.7e-08 62.4 192 28.6
Glyma.07G228900 Glycine max HOM05D001837 ORTHO05D003156 6.2e-08 62.0 220 28.6
MD06G1194900 Malus domestica HOM05D001837 ORTHO05D003156 6.2e-08 62.0 208 24.5
Psat4g050040 Pisum sativum HOM05D001837 ORTHO05D003156 6.2e-08 62.0 212 27.4
Gohir.A13G076400 Gossypium hirsutum HOM05D001837 ORTHO05D003156 8.1e-08 61.6 183 26.8
Lalb_Chr13g0303151 Lupinus albus HOM05D001837 ORTHO05D003156 1.8e-07 60.5 205 28.3
Medtr4g108720 Medicago truncatula HOM05D001837 ORTHO05D003156 1.8e-07 60.5 201 26.4
Duzib251G0307 Durio zibethinus HOM05D001837 ORTHO05D003156 3.1e-07 59.7 145 29.7
MELO3C012107.2 Cucumis melo HOM05D001837 ORTHO05D003156 5.3e-07 58.9 194 28.4
TPR.G9249 Trifolium pratense HOM05D001837 ORTHO05D003156 6.9e-07 58.5 205 28.8
EL10Ac8g20399 Beta vulgaris HOM05D001837 ORTHO05D003156 1.2e-06 57.8 125 32.0
Ca_18825_v3 Cicer arietinum L. HOM05D001837 ORTHO05D003156 1.5e-06 57.4 213 28.2
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.5e-06 57.4 263 24.7
Gohir.D12G180800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 1.5e-06 57.4 161 26.7
MBI15_g02239_MAGBIO Magnolia biondii HOM05D001378 ORTHO05D001249 3.4e-06 56.2 74 32.4
Ah.02g113630 Amaranthus hybridus HOM05D001837 ORTHO05D003156 4.4e-06 55.8 162 29.6
Cc04_g16420 Coffea canephora HOM05D001837 ORTHO05D003156 5.8e-06 55.5 129 28.7
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.8e-06 55.5 263 25.1
Sed0010468 Sechium edule HOM05D001837 ORTHO05D003156 9.9e-06 54.7 195 23.6


User provided reference genes

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