Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g034710 Solanum pennellii HOM05D012087 ORTHO05D005932 1.9e-128 462.6 248 100.0
Solyc03g115730.3 Solanum lycopersicum HOM05D012087 ORTHO05D005932 3.0e-118 428.7 248 92.3
PGSC0003DMG400024562 Solanum tuberosum HOM05D012087 ORTHO05D005932 5.9e-114 414.5 248 89.1
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 7.8e-82 307.8 242 68.6
Nitab4.5_0005900g0030 Nicotiana tabacum HOM05D012087 ORTHO05D005932 3.1e-78 295.8 246 68.3
CAN.G479.59 Capsicum annuum HOM05D012087 ORTHO05D005932 3.3e-72 275.8 261 63.2
Peaxi162Scf00274g00335 Petunia axillaris HOM05D012087 ORTHO05D005932 8.4e-60 234.6 217 59.0
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 5.7e-16 89.0 210 36.2
Migut.D01759 Erythranthe guttata HOM05D012087 ORTHO05D005932 2.0e-13 80.5 212 32.1
SalBow5G3698 Salvia bowleyana HOM05D012087 ORTHO05D005932 3.8e-12 76.3 230 29.1
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 1.4e-11 74.3 218 29.8
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 4.2e-11 72.8 213 30.5
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 9.4e-11 71.6 210 29.5
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 1.2e-10 71.2 207 30.4
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 1.6e-10 70.9 232 29.3
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 7.9e-10 68.6 207 31.4
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 1.0e-09 68.2 220 35.0
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 1.0e-09 68.2 206 35.0
Oeu052457.1 Olea europaea HOM05D012087 ORTHO05D005932 1.8e-09 67.4 184 34.8
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 3.0e-09 66.6 194 29.9
SGA_v2.0_scaffold313G48329 Striga asiatica HOM05D012087 ORTHO05D005932 3.9e-09 66.2 241 29.5
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 8.8e-09 65.1 247 33.6
Oeu047275.1 Olea europaea HOM05D012087 ORTHO05D005932 2.0e-08 63.9 194 30.4
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 4.4e-08 62.8 200 34.5
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 9.7e-08 61.6 232 27.6
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 2.2e-07 60.5 221 31.2
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 2.8e-07 60.1 240 27.9
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 3.7e-07 59.7 219 29.2
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 4.8e-07 59.3 216 31.0
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 4.8e-07 59.3 189 31.2
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 1.1e-06 58.2 212 29.7
THA.LOC104818323 Tarenaya hassleriana HOM05D010063 ORTHO05D011941 1.1e-06 58.2 220 27.3
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.8e-06 57.4 219 32.0
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 4.1e-06 56.2 238 27.7
BcaB01g06057 Brassica carinata HOM05D010063 ORTHO05D011941 9.1e-06 55.1 247 27.9
BolC3t12923H Brassica oleracea HOM05D010063 ORTHO05D011941 9.1e-06 55.1 247 27.9
CiPaw.06G088700 Carya illinoinensis HOM05D009095 ORTHO05D005932 9.1e-06 55.1 226 27.9
Haze_07652 Corylus avellana HOM05D008369 ORTHO05D005932 9.1e-06 55.1 179 35.8
Lsat_1_v5_gn_1_14361 Lactuca sativa HOM05D008369 ORTHO05D005932 9.1e-06 55.1 230 26.5
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 9.1e-06 55.1 220 32.3


User provided reference genes

Program Settings