Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g115490.1 Solanum lycopersicum HOM05D004709 ORTHO05D005669 4.1e-41 171.0 89 100.0
Sopen03g034490 Solanum pennellii HOM05D004709 ORTHO05D005669 4.1e-41 171.0 89 100.0
PGSC0003DMG400024653 Solanum tuberosum HOM05D004709 ORTHO05D005669 4.1e-41 171.0 89 100.0
CAN.G479.31 Capsicum annuum HOM05D004709 ORTHO05D005669 1.3e-39 166.0 89 95.5
Nitab4.5_0002881g0040 Nicotiana tabacum HOM05D004709 ORTHO05D005669 9.4e-38 159.8 87 93.1
Nitab4.5_0004511g0070 Nicotiana tabacum HOM05D004709 ORTHO05D005669 2.1e-37 158.7 87 92.0
HanXRQChr05g0157171 Helianthus annuus HOM05D004709 ORTHO05D005669 2.6e-32 141.7 89 76.4
Nn4g23362 Nelumbo nucifera HOM05D004709 ORTHO05D005669 2.9e-31 138.3 85 77.6
MBI16_g16369_MAGBIO Magnolia biondii HOM05D004709 ORTHO05D005669 1.5e-30 136.0 89 71.9
Lsat_1_v5_gn_5_22101 Lactuca sativa HOM05D004709 ORTHO05D005669 1.9e-30 135.6 87 72.4
Peaxi162Scf00106g00072 Petunia axillaris HOM05D004709 ORTHO05D005669 3.2e-30 134.8 82 82.9
Sed0002201 Sechium edule HOM05D004709 ORTHO05D005669 3.2e-30 134.8 87 73.6
PSO478G1650 Papaver somniferum HOM05D004709 ORTHO05D005669 4.2e-30 134.4 86 73.3
Aqoxy3G03572 Aquilegia oxysepala HOM05D004709 ORTHO05D005669 5.5e-30 134.0 83 77.1
COL.COLO4_36893 Corchorus olitorius HOM05D004709 ORTHO05D005669 5.5e-30 134.0 86 74.4
Prupe.3G258000 Prunus persica HOM05D004709 ORTHO05D005669 7.2e-30 133.7 87 74.7
Thecc.03G097000 Theobroma cacao HOM05D004709 ORTHO05D005669 7.2e-30 133.7 86 75.6
CiPaw.11G049800 Carya illinoinensis HOM05D004709 ORTHO05D005669 1.2e-29 132.9 86 74.4
TAR371G0159 Trochodendron aralioides HOM05D004709 ORTHO05D005669 1.6e-29 132.5 83 79.5
TAR622G0455 Trochodendron aralioides HOM05D004709 ORTHO05D005669 1.6e-29 132.5 83 78.3
MELO3C002013.2 Cucumis melo HOM05D004709 ORTHO05D005669 2.1e-29 132.1 89 70.8
MD00G1156500 Malus domestica HOM05D004709 ORTHO05D005669 2.1e-29 132.1 83 74.7
MD09G1062400 Malus domestica HOM05D004709 ORTHO05D005669 2.1e-29 132.1 84 75.0
QL10p018658 Quercus lobata HOM05D004709 ORTHO05D005669 2.1e-29 132.1 83 78.3
ClCG04G011960 Citrullus lanatus HOM05D004709 ORTHO05D005669 2.7e-29 131.7 87 71.3
Rhsim08G0148900 Rhododendron simsii HOM05D004709 ORTHO05D005669 2.7e-29 131.7 83 78.3
Gohir.A12G180600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 3.6e-29 131.3 86 72.1
CsaV3_1G005830 Cucumis sativus L. HOM05D004709 ORTHO05D005669 4.7e-29 131.0 89 69.7
Eucgr.B00568 Eucalyptus grandis HOM05D004709 ORTHO05D005669 4.7e-29 131.0 88 75.0
Gohir.D12G183300 Gossypium hirsutum HOM05D004709 ORTHO05D005669 4.7e-29 131.0 86 72.1
Nn3g17388 Nelumbo nucifera HOM05D004709 ORTHO05D005669 4.7e-29 131.0 85 72.9
COL.COLO4_31014 Corchorus olitorius HOM05D004709 ORTHO05D005669 8.0e-29 130.2 86 72.1
Duzib205G1485 Durio zibethinus HOM05D004709 ORTHO05D005669 8.0e-29 130.2 86 73.3
ECA246G5156 Erigeron canadensis HOM05D004709 ORTHO05D005669 1.0e-28 129.8 82 76.8
PGR083G1512 Punica granatum HOM05D004709 ORTHO05D005669 1.0e-28 129.8 86 75.6
Manes.06G087400 Manihot esculenta HOM05D004709 ORTHO05D005669 1.8e-28 129.0 83 74.7
Sc10g0003220 Simmondsia chinensis HOM05D004709 ORTHO05D005669 2.3e-28 128.6 85 72.9
TWI18G0167 Tripterygium wilfordii HOM05D004709 ORTHO05D005669 2.3e-28 128.6 88 70.5
ATR0064G063 Amborella trichopoda HOM05D004709 ORTHO05D005669 3.0e-28 128.3 86 73.3
Duzib084G0757 Durio zibethinus HOM05D004709 ORTHO05D005669 3.0e-28 128.3 86 72.1
CANSAT56G2672 Cannabis sativa HOM05D004709 ORTHO05D005669 5.2e-28 127.5 85 69.4
Cpa.g.sc94.6 Carica papaya HOM05D004709 ORTHO05D005669 5.2e-28 127.5 86 72.1
Migut.D01673 Erythranthe guttata HOM05D004709 ORTHO05D005669 5.2e-28 127.5 86 70.9
Nn7g35950 Nelumbo nucifera HOM05D004709 ORTHO05D005669 5.2e-28 127.5 82 74.4
SalBow5G3312 Salvia bowleyana HOM05D004709 ORTHO05D005669 5.2e-28 127.5 84 72.6
AUR62042435 Chenopodium quinoa HOM05D004709 ORTHO05D005669 6.7e-28 127.1 84 71.4
Ciclev10022528m.g Citrus clementina HOM05D004709 ORTHO05D005669 6.7e-28 127.1 85 68.2
Gorai.008G196600 Gossypium raimondii HOM05D004709 ORTHO05D005669 6.7e-28 127.1 86 70.9
RcHm_v2.0_Chr2g0166371 Rosa chinensis HOM05D004709 ORTHO05D005669 6.7e-28 127.1 84 71.4
Atru.chr2.2420 Acer truncatum HOM05D004709 ORTHO05D005669 8.8e-28 126.7 87 67.8
ClCG06G015840 Citrullus lanatus HOM05D004709 ORTHO05D005669 8.8e-28 126.7 88 67.0
AUR62018162 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.5e-27 125.9 84 70.2
MELO3C017207.2 Cucumis melo HOM05D004709 ORTHO05D005669 2.0e-27 125.6 88 63.6
FvH4_6g47340 Fragaria vesca HOM05D004709 ORTHO05D005669 2.6e-27 125.2 88 69.3
AUR62008495 Chenopodium quinoa HOM05D004709 ORTHO05D005669 3.3e-27 124.8 88 63.6
FAN14G4554 Fragaria x ananassa HOM05D004709 ORTHO05D005669 3.3e-27 124.8 85 70.6
Manes.14G083600 Manihot esculenta HOM05D004709 ORTHO05D005669 3.3e-27 124.8 83 71.1
Zm00001eb398330 Zea mays HOM05D004709 ORTHO05D005669 4.4e-27 124.4 85 71.8
Phvul.008G035200 Phaseolus vulgaris HOM05D004709 ORTHO05D005669 5.7e-27 124.0 87 67.8
Sed0019301 Sechium edule HOM05D004709 ORTHO05D005669 7.5e-27 123.6 87 64.4
Ah.10g032000 Amaranthus hybridus HOM05D004709 ORTHO05D005669 9.7e-27 123.2 83 71.1
Glyma.08G242600 Glycine max HOM05D004709 ORTHO05D005669 9.7e-27 123.2 87 70.1
EL10Ac2g03100 Beta vulgaris HOM05D004709 ORTHO05D005669 1.7e-26 122.5 83 68.7
Lsat_1_v5_gn_1_13721 Lactuca sativa HOM05D004709 ORTHO05D005669 2.2e-26 122.1 86 67.4
Potri.009G079800 Populus trichocarpa HOM05D004709 ORTHO05D005669 2.8e-26 121.7 84 71.4
Sed0023667 Sechium edule HOM05D004709 ORTHO05D005669 2.8e-26 121.7 87 67.8
Cfa019297 Carpinus fangiana HOM05D004709 ORTHO05D005669 3.7e-26 121.3 83 69.9
FAN09G0998 Fragaria x ananassa HOM05D004709 ORTHO05D005669 3.7e-26 121.3 85 68.2
Aa31LG11G2140 Aethionema arabicum HOM05D004709 ORTHO05D005669 4.8e-26 120.9 85 69.4
Os08g0239000 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 6.3e-26 120.6 84 67.9
Prupe.5G200900 Prunus persica HOM05D004709 ORTHO05D005669 6.3e-26 120.6 84 69.0
Ca_06818_v3 Cicer arietinum L. HOM05D004709 ORTHO05D005669 8.3e-26 120.2 85 67.1
Gohir.A03G069100 Gossypium hirsutum HOM05D004709 ORTHO05D005669 8.3e-26 120.2 82 69.5
FAN05G1711 Fragaria x ananassa HOM05D004709 ORTHO05D005669 1.1e-25 119.8 85 67.1
Glyma.18G264800 Glycine max HOM05D004709 ORTHO05D005669 1.1e-25 119.8 87 66.7
THA.LOC104801321 Tarenaya hassleriana HOM05D004709 ORTHO05D005669 1.1e-25 119.8 85 68.2
HanXRQChr04g0101451 Helianthus annuus HOM05D004709 ORTHO05D005669 1.8e-25 119.0 83 66.3
FAN02G1874 Fragaria x ananassa HOM05D004709 ORTHO05D005669 3.1e-25 118.2 88 65.9
Lalb_Chr10g0093091 Lupinus albus HOM05D004709 ORTHO05D005669 4.1e-25 117.9 83 67.5
Os10g0406600 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 5.3e-25 117.5 85 65.9
Zm00001eb011200 Zea mays HOM05D004709 ORTHO05D005669 5.3e-25 117.5 85 67.1
Gohir.D03G095600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 7.0e-25 117.1 82 68.3
Gorai.003G100300 Gossypium raimondii HOM05D004709 ORTHO05D005669 7.0e-25 117.1 82 68.3
DCAR_013071 Daucus carota HOM05D000316 ORTHO05D000374 1.6e-24 115.9 78 75.6
Medtr0287s0050 Medicago truncatula HOM05D004709 ORTHO05D005669 3.5e-24 114.8 85 64.7
Medtr7g012870 Medicago truncatula HOM05D004709 ORTHO05D005669 3.5e-24 114.8 85 64.7
SHI27018 Sapria himalayana HOM05D004709 ORTHO05D005669 4.5e-24 114.4 81 65.4
Lj1g0000800 Lotus japonicus HOM05D004709 ORTHO05D005669 7.7e-24 113.6 86 66.3
Rhsim12G0152500 Rhododendron simsii HOM05D004709 ORTHO05D005669 1.0e-23 113.2 78 73.1
Dinv10689 Davidia involucrata HOM05D004709 ORTHO05D005669 1.7e-23 112.5 72 73.6
Psat3g200920 Pisum sativum HOM05D004709 ORTHO05D005669 2.9e-23 111.7 85 62.4
Actinidia09247 Actinidia chinensis HOM05D004709 ORTHO05D005669 6.5e-23 110.5 69 79.7
HanXRQChr17g0545301 Helianthus annuus HOM05D004709 ORTHO05D005669 1.9e-22 109.0 83 62.7
Thhalv10005205m.g Eutrema salsugineum HOM05D004709 ORTHO05D005669 1.6e-21 105.9 82 61.0
Mapoly0030s0074 Marchantia polymorpha HOM05D004709 ORTHO05D005669 2.1e-21 105.5 85 56.5
CARHR274970 Cardamine hirsuta HOM05D004709 ORTHO05D005669 2.7e-21 105.1 82 59.8
Dinv38784 Davidia involucrata HOM05D004709 ORTHO05D005669 2.7e-21 105.1 62 80.6
AL8G37880 Arabidopsis lyrata HOM05D004709 ORTHO05D005669 4.7e-21 104.4 82 59.8
Actinidia04845 Actinidia chinensis HOM05D004709 ORTHO05D005669 6.1e-21 104.0 61 83.6
MD08G1088600 Malus domestica HOM05D004709 ORTHO05D005669 6.1e-21 104.0 81 61.7
Pp3c1_9190 Physcomitrium patens HOM05D004709 ORTHO05D005669 6.1e-21 104.0 86 57.0
C02p61460 Brassica napus HOM05D004709 ORTHO05D005669 8.0e-21 103.6 81 58.0
BolC2t12197H Brassica oleracea HOM05D004709 ORTHO05D005669 8.0e-21 103.6 81 58.0
AT5G61220 Arabidopsis thaliana HOM05D004709 ORTHO05D005669 1.4e-20 102.8 82 59.8
BcaC06g33217 Brassica carinata HOM05D004709 ORTHO05D005669 2.3e-20 102.1 82 57.3
C07p44900 Brassica napus HOM05D004709 ORTHO05D005669 4.0e-20 101.3 82 57.3
BolC7t45013H Brassica oleracea HOM05D004709 ORTHO05D005669 4.0e-20 101.3 82 57.3
Carub.0008s2188 Capsella rubella HOM05D004709 ORTHO05D005669 4.0e-20 101.3 82 58.5
Sp2g24450 Schrenkiella parvula HOM05D004709 ORTHO05D005669 4.0e-20 101.3 79 60.8
GSVIVG01007919001 Vitis vinifera HOM05D004709 ORTHO05D005669 6.8e-20 100.5 68 66.2
A03p46850 Brassica napus HOM05D004709 ORTHO05D005669 8.8e-20 100.1 82 56.1
Sc04g0003050 Simmondsia chinensis HOM05D004709 ORTHO05D005669 8.8e-20 100.1 81 58.0
BraA02t09093Z Brassica rapa HOM05D004709 ORTHO05D005669 1.2e-19 99.8 79 58.2
Gohir.D12G183150 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.2e-19 99.8 67 70.1
A02p41520 Brassica napus HOM05D004709 ORTHO05D005669 1.5e-19 99.4 79 58.2
AUR62021597 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.5e-19 99.4 90 54.4
BcaC07g40932 Brassica carinata HOM05D004709 ORTHO05D005669 2.6e-19 98.6 79 57.0
C08p39260 Brassica napus HOM05D004709 ORTHO05D005669 2.6e-19 98.6 79 57.0
Atru.chr9.371 Acer truncatum HOM05D004709 ORTHO05D005669 4.4e-19 97.8 80 60.0
BcaC01g01257 Brassica carinata HOM05D004709 ORTHO05D005669 7.5e-19 97.1 79 57.0
C06p42660 Brassica napus HOM05D004709 ORTHO05D005669 7.5e-19 97.1 79 58.2
BolC3t21308H Brassica oleracea HOM05D004709 ORTHO05D005669 7.5e-19 97.1 79 57.0
C07p56170 Brassica napus HOM05D004709 ORTHO05D005669 9.8e-19 96.7 79 57.0
BolC6t39173H Brassica oleracea HOM05D004709 ORTHO05D005669 9.8e-19 96.7 79 57.0
C03p89860 Brassica napus HOM05D004709 ORTHO05D005669 1.3e-18 96.3 79 57.0
BraA03t13805Z Brassica rapa HOM05D004709 ORTHO05D005669 1.3e-18 96.3 82 53.7
BcaC06g33172 Brassica carinata HOM05D004709 ORTHO05D005669 1.7e-18 95.9 84 56.0
CBR_g38475 Chara braunii HOM05D004709 ORTHO05D005669 2.2e-18 95.5 85 51.8
A03p02360 Brassica napus HOM05D004709 ORTHO05D005669 4.8e-18 94.4 78 55.1
BcaC03g18433 Brassica carinata HOM05D004709 ORTHO05D005669 8.3e-18 93.6 79 55.7
C02p63420 Brassica napus HOM05D004709 ORTHO05D005669 8.3e-18 93.6 79 55.7
BolC2t12409H Brassica oleracea HOM05D004709 ORTHO05D005669 8.3e-18 93.6 79 55.7
Pp3c9_6850 Physcomitrium patens HOM05D004709 ORTHO05D005669 3.1e-17 91.7 86 52.3
Medtr7g083770 Medicago truncatula HOM05D004709 ORTHO05D005669 9.1e-17 90.1 73 57.5
CSS0011072 Camellia sinensis var. sinensis HOM05D004709 ORTHO05D005669 2.0e-16 89.0 62 71.0
Carub.0006s3376 Capsella rubella HOM05D004709 ORTHO05D005669 1.0e-15 86.7 81 55.6
C05p13760 Brassica napus HOM05D004709 ORTHO05D005669 2.9e-15 85.1 72 56.9
BolC5t30114H Brassica oleracea HOM05D004709 ORTHO05D005669 2.9e-15 85.1 72 56.9
BcaC05g25635 Brassica carinata HOM05D004709 ORTHO05D005669 3.8e-15 84.7 72 56.9
BraA07t31299Z Brassica rapa HOM05D004709 ORTHO05D005669 8.6e-15 83.6 72 55.6
Cre08.g382850 Chlamydomonas reinhardtii HOM05D004709 ORTHO05D005669 3.3e-14 81.6 80 48.8
Sabra09G0061800 Salix brachista HOM05D004709 ORTHO05D005669 2.1e-13 79.0 57 66.7
SMO174G0212 Selaginella moellendorffii HOM05D004709 ORTHO05D005669 6.1e-13 77.4 82 51.2
PRCOL_00002203 Prasinoderma coloniale HOM05D004709 ORTHO05D005669 5.2e-12 74.3 84 47.6
CARHR099960 Cardamine hirsuta HOM05D004709 ORTHO05D005669 4.4e-11 71.2 64 53.1
unitig_37.g12784 Utricularia gibba HOM05D004709 ORTHO05D005669 6.3e-10 67.4 59 55.9
BcaC03g15765 Brassica carinata HOM05D004709 ORTHO05D005669 3.1e-09 65.1 79 48.1
CDE02G0474 Ceratophyllum demersum HOM05D004709 ORTHO05D005669 2.0e-08 62.4 44 70.5
Cfa024147 Carpinus fangiana HOM05D004709 ORTHO05D005669 1.3e-07 59.7 69 42.0
MCO16G339 Micromonas commoda HOM05D004709 ORTHO05D005669 6.6e-07 57.4 81 37.0
Cc00_g02290 Coffea canephora HOM05D004709 ORTHO05D005669 1.1e-06 56.6 35 80.0
BraA10t43343Z Brassica rapa HOM05D004709 ORTHO05D005669 3.3e-06 55.1 48 54.2


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