Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 5.5e-67 257.7 147 100.0
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 1.8e-65 252.7 147 91.8
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 7.0e-46 187.6 145 77.2
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.5e-44 180.6 144 72.2
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.4e-41 173.3 143 67.8
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 9.4e-35 150.6 90 84.4
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.6e-26 123.2 91 74.7
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.7e-26 122.5 91 73.6
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 2.4e-22 109.4 152 47.4
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 4.1e-22 108.6 154 45.5
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 2.7e-21 105.9 86 61.6
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 7.2e-19 97.8 87 58.6
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 2.8e-18 95.9 102 51.0
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.5e-16 90.1 96 53.1
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 3.4e-16 89.0 83 61.4
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 4.9e-15 85.1 146 38.4
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 8.3e-15 84.3 84 47.6
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.2e-13 80.5 92 52.2
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.9e-12 75.9 107 42.1
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 2.9e-12 75.9 106 44.3
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 5.0e-12 75.1 85 50.6
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 6.6e-12 74.7 107 41.1
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 1.1e-11 73.9 144 37.5
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 3.3e-11 72.4 87 43.7
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 5.6e-11 71.6 87 47.1
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 7.3e-11 71.2 103 40.8
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 7.3e-11 71.2 98 44.9
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.2e-10 70.5 87 46.0
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.2e-10 70.5 73 47.9
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 1.6e-10 70.1 92 42.4
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 2.1e-10 69.7 151 37.7
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.1e-10 69.7 143 38.5
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 3.6e-10 68.9 88 46.6
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 6.1e-10 68.2 111 42.3
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 8.0e-10 67.8 83 44.6
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 8.0e-10 67.8 96 42.7
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 8.0e-10 67.8 101 40.6
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.4e-09 67.0 129 38.0
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.4e-09 67.0 87 44.8
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.4e-09 67.0 100 39.0
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 2.3e-09 66.2 146 38.4
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 3.1e-09 65.9 105 40.0
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 4.0e-09 65.5 112 38.4
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 4.0e-09 65.5 85 40.0
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 5.2e-09 65.1 87 42.5
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 5.2e-09 65.1 143 32.9
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 6.8e-09 64.7 69 46.4
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 6.8e-09 64.7 87 43.7
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 6.8e-09 64.7 79 43.0
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 8.9e-09 64.3 87 43.7
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.0e-08 63.2 134 32.8
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 2.0e-08 63.2 82 41.5
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.0e-08 63.2 70 47.1
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.0e-08 63.2 86 41.9
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 2.6e-08 62.8 110 36.4
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 3.4e-08 62.4 140 32.1
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 3.4e-08 62.4 75 44.0
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 4.4e-08 62.0 146 33.6
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 5.8e-08 61.6 111 36.9
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 7.5e-08 61.2 75 44.0
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.3e-07 60.5 70 45.7
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.3e-07 60.5 128 30.5
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.7e-07 60.1 70 45.7
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.7e-07 58.9 48 56.2
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 3.7e-07 58.9 98 36.7
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 4.9e-07 58.5 98 38.8
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 1.1e-06 57.4 78 37.2
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.1e-06 57.4 83 37.3
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.9e-06 56.6 83 37.3
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 1.9e-06 56.6 108 38.9
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.9e-06 56.6 140 30.0
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 3.2e-06 55.8 147 33.3
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 4.1e-06 55.5 74 40.5
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 4.1e-06 55.5 140 30.7
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 5.4e-06 55.1 95 35.8


User provided reference genes

Program Settings